wegnerce Goto Github PK
Name: Carl-Eric Wegner
Type: User
Company: Friedrich Schiller University Jena - Aquatic Geomicrobiology
Bio: PI - Microbial Physiology / Environmental Microbiology / (Meta)genomics/-transcriptomics
Location: Jena, Germany
Carl-Eric Wegner's Projects
ampliconian
Plaground for scripting related to amplicon data analysis
chembiosys_metag_workshop_2023
mkegg
Initial commit
peng_et_al_2018
Details about metatranscriptome data processing in Peng et al., 2018 https://doi.org/10.1186/s40168-018-0546-9
python_scripting
r_workshop_crc_aquadiva
smk_16s_ampseq
Snakemake workflow for the processing of 16S rRNA gene-derived amplicon sequencing data
smk_emseq
Snakemake workflow for the processing of EMseq data
smk_markerseq
A Snakemake workflow for marker-gene-derived amplicon sequencing data
smk_rnaseq
Snakemake workflow for the processing of RNAseq data
smk_slurm_profile
Snakemake profile for SLURM
taxomias
an easy to use implementation of the NCBI taxonomy database for daily use
tools_custom
visualizationmethods
Reproducible scripts for creating figures in differential expression visualization paper
wegnerce.github.io
Repository for my private webage exploringmicrobes.science
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