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  • šŸ‘‹ Hi, Iā€™m Hamish Mehaffey, current @ the Brainard Lab, working on songbirds @ UCSF (former Doupe lab, former electric fish person).

Interested in neural imaging, electrophysiology, behavioral analyis both auditory and video, and methods for dealing with sounds.

This is mostly a pile of stuff I've written either for song-triggered acquisition (for getting songs from birds!) that interacts with MicroManager, USB Webcams, or that does Screening or Tutoring or Callback experiments. Some MicroManager plugins as well.

whmehaffey's Projects

mm_rollingmeanimagesub icon mm_rollingmeanimagesub

MicroManager 2.0 Plugin for focusing- keeps 50 images, subtracts the mean from the earliest 5, to allow looking for gCAMP cells easily.

pycbs_3_6 icon pycbs_3_6

Python version of CBS (Catch Bird Singing) for single audio card.

pyspinmulticam icon pyspinmulticam

Simple library for controlling/syncing multiple Spinnaker (Blackfly) cams

pytutor icon pytutor

Python/Sapphire based recording/computer tutoring software

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