Comments (3)
Thanks for this! They are produced in the code so are outputted into the outputs
folder, they are finalData and finalPreterm for LBW and Preterm respectively. A lot of code would need to be change to change these names, so I have added this detail into the readMe file (in commit Tidying up (2)
- is this clear or does it need a different solution?
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@ellenBradley18 I think it will be ok if you make it clear on the read me on the first page for the project (and maybe with another read me in this folder) that the files that are in the folder are the results of the code and match the files the code will generate and place in LBW Bayesian Modelling Code/output folder.
As long as we can clearly see where the files came from it should be fine.
That being said, if I look for LBWfinalInputDatabase.csv or LBWfinalInputDatabase.rds in the LBW Bayesian Modelling Code/input folder, I can't find it. Does it have a different name there? If so, that needs to be made clear somewhere. Either in the read mes, or....even better I would think is to change the name of the file in the LBW Bayesian Modelling Code/input folder to match the Quick Access folder file name. You would need to slightly change the code files that reference it, but I think it would be a simple change that would help a lot with clarity.
But that's just my opinion (and maybe I am misunderstanding the function of these files.)
from mca-pretermbirths-analysis.
I have amended the code so that the final input databases that are created in the code and written into the output
folders have the same name as the Quick Access
final input databases!
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Related Issues (20)
- LBW Regional Groupings - Final Comments HOT 1
- Preterm Bayesian Modelling Code - General - output/input files HOT 1
- Preterm Bayesian Modelling Code - 0.masterP.R - Errors - R source filenames HOT 2
- Preterm Bayesian Modelling Code - 3.fitModelsP_singMultDQC.R - Error - Destination folder missing HOT 1
- Preterm Bayesian Modelling Code - 1.cleanAdminP2.R - Warning - excel dates HOT 1
- Preterm Bayesian Modelling Code - 1.cleanAdminP2.R - Warning - NAs HOT 1
- Preterm Bayesian Modelling Code - 1.cleanAdminP2.R - Warning - NAs HOT 1
- Preterm Bayesian Modelling Code - 1.cleanSurveyP2.R - Warning - NAs HOT 1
- Preterm Bayesian Modelling Code - 1.combineAdminandSurvey2.R - Warning - empty addOn2 HOT 1
- Preterm Bayesian Modelling Code - 1.inclusionExclusion5.R - Warning - ISO codes HOT 1
- Preterm Bayesian Modelling Code - 1.dqc4.R - Warning - excel dates HOT 1
- Preterm Bayesian Modelling Code - 1.dqc4.R - Warning - excel dates HOT 1
- Preterm Bayesian Modelling Code - 5. Plot countries P (1 model) 1 plot.R - file missing HOT 1
- Preterm Bayesian Modelling Code - 6.subgroupsMetaP.R - duplicate calls to source HOT 1
- Preterm Bayesian Modelling Code - 6.subgroupsMetaP.R - Warning - Fisher scoring algorithm HOT 1
- Preterm Bayesian Modelling Code - 0.loadPackages.R / 6.subgroupsMetaP.R - Error - library calls HOT 1
- Preterm Bayesian Modelling Code -Testing Run 2023-08-08 - Final Comments HOT 1
- Preterm Regional Groupings - Final Comments HOT 1
- Preterm Bayesian Modelling Code -7. splineModelsValidationP.R - 1000 iterations HOT 1
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