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Yim Lab

Our website is based on the open source templates designed and shared by the labs of Dr. Won Yim. We downloaded source codes from their repository and modified our contents based on shared templates.

The website is deployed using GitHub Pages and the source code is available on GitHub.

Main site

  • _pages/home.md

Publication site

  • _pages/publications.md

Member site

This website code was fork from Sanders lab

Won Cheol Yim's Projects

agentgpt icon agentgpt

๐Ÿค– Assemble, configure, and deploy autonomous AI Agents in your browser.

agin icon agin

Process SMRT sequencing kinetic summary to predict regional methylation on large genome

ahrd icon ahrd

High throughput protein function annotation with Human Readable Description (HRDs) and Gene Ontology (GO) Terms.

allhic icon allhic

A package to scaffolding polyploidy or heterozygosis genome using Hi-C data

allhic-1 icon allhic-1

Genome scaffolding based on HiC data in heterozygous and high ploidy genomes

allhic-2 icon allhic-2

ALLHiC: phasing and scaffolding polyploid genomes based on Hi-C data

answers icon answers

Random code produced to answer questions on biostars/seqanswers/etc.

anvio icon anvio

An analysis and visualization platform for 'omics data

ascendo icon ascendo

๐Ÿ’Ž ๐Ÿณ A super customizable Jekyll theme for personal site, team site, blog, project, documentation, etc.

assemblage icon assemblage

Tools for working with second gen assemblies, fasta sequences, etc

augustus icon augustus

AUGUSTUS v3.2.1 for installation on Mac OS X

barrnap icon barrnap

:microscope: :leo: Bacterial ribosomal RNA predictor

bartender-1.1 icon bartender-1.1

This bartender version could handle arbitrary length of barcode

bds-files icon bds-files

Supplementary files for my book, "Bioinformatics Data Skills"

biocode icon biocode

Bioinformatics code libraries and scripts

bioinfo-scripts icon bioinfo-scripts

Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformaticians scripts/ folder

bioinformatics-utilities icon bioinformatics-utilities

Bioinformatics scripts, primarily in perl, dealing primarily with RNA-Seq data and statistics on .fasta files.

blasr icon blasr

BLASR: The PacBioยฎ long read aligner

blast2cap3 icon blast2cap3

A tool for merging transcriptome assemblies via protein homology

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