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awesome-single-cell icon awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bdk-irwr icon bdk-irwr

An improved random walk -based method on prioritizing cancer genes based on cancer-specific network

blasso icon blasso

Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers

cait icon cait

Code for Covariate Adjusted Interaction Trees

cmapr icon cmapr

Tools for manipulating annotated data matrices

coloc icon coloc

Repo for the R package coloc

corncob icon corncob

Count Regression for Correlated Observations with the Beta-binomial

d.radiodurans_ppi_rwr_hd icon d.radiodurans_ppi_rwr_hd

This repository contains the R code and Cytoscape files that were used for the project in the MSB course Network Biology.

debugr icon debugr

Debug tool to watch objects/expressions while running an R script

deepirna icon deepirna

data and source codes for paper "DeepiRNA: Predicting transposon-derived piRNAs with deep learning"

diffubench icon diffubench

The effect of statistical normalisation on network propagation scores

drawr icon drawr

Discriminative Random Walk with Restart

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