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Name: Minjun Yang
Type: User
Company: Lund university
Location: Lund
Name: Minjun Yang
Type: User
Company: Lund university
Location: Lund
Structural variants calling for Affymetrix Arrays
Fast and accurate gene fusion detection from RNA-Seq data
ASCAT copy number R package
A tool to map bisulfite converted sequence reads and determine cytosine methylation states
The next version of bwa-mem
Faster BWA-MEM2 using learned-index
Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel
Vcf file utilities
Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps
Search for activating regulatory variants in the tumor genome
cython + htslib == fast VCF and BCF processing
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
FAN-C: Framework for the ANalysis of C-like data
Splits fastq files evenly
Create timecourse "fish plots" that show changes in the clonal architecture of tumors
Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
Lollipop-diagram to visualize genomic mutations
Lollipop-diagram to interactively visualize genetic mutations
Official code repository for GATK versions 4 and up
Cloud-based single-cell copy-number variation analysis tool
GRIDSS: the Genomic Rearrangement IDentification Software Suite
Standalone GRIDSS/PURPLE/LINX pipeline
Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF
Various algorithms for analysing genomics data
Tools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy.
Resource of human chromosome schematics & images
Python program designed to reconstruct immunoglobulin gene rearrangements and oncogenic translocations from WGS, WES and capture NGS in lymphoid neoplasms.
Structural variant and indel caller for mapped sequencing data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.