Comments (4)
tuannguyen8390
commented on June 12, 2024
I'm also interest in this, passing --include_all_ctgs would be nice for non-model species (bovine in my case)
from duet.
aquaskyline
commented on June 12, 2024
We are working on enabling more user controls and will release an update soon.
from duet.
yekaizhou
commented on June 12, 2024
Hi,
Duet has been updated that can call all chromosomes and contigs. Please update duet to version 0.4 and add the option '--include_all_ctgs' for your needs.
Thanks,
Yekai
from duet.
fmobegi
commented on June 12, 2024
Thanks
from duet.
Related Issues (13)
- SNP calling not working HOT 6
- bug: np.int() no longer exists. HOT 6
- Compatibility with SURVIVOR HOT 5
- Request: A docker image with duet HOT 3
- Combining calls from multiple samples
- Increase support for species with. different number of chromosome HOT 2
- pinned bcftools version libcrypto.so.1.0.0: issue HOT 4
- [Enhancement] Sniffles as extra sv_caller HOT 3
- SNP phasing not running HOT 6
- Feature enhancement: ability to provide sample name for VCF HOT 1
- error when run the duet demo data HOT 6
- Could not load dynamic library 'libcudart.so.11.0'; dlerror: HOT 2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from duet.