Related Issues (20)
- Remove PCR duplicates using barcode_collapse_pe.py or picard? HOT 1
- Main.py fails to import call_peaks.py, prints usage for peaksmodule.cc instead HOT 2
- pre-mRNA option not working? HOT 1
- clipper displays unusual help messages and can't be used HOT 9
- CLIPper complains file does not exist while it obviously exists HOT 2
- CLIPper runs forever for empty bam files
- Runtime of CLIPer? HOT 3
- A solution to core dumped and/or running too slow HOT 2
- why poisson_cutoff not actually used in call_peak.py since it is an additional significance filtering based on count
- How to know the peaks called after clipper HOT 3
- Exception errors when running pool.py (list index out of range)(SOVLED) HOT 1
- Problem using Clipper with a cytoplasmic RBP that binds to spliced mRNA
- reverse_strand argument for seCLIP peaks?
- invalid contig chr3
- Run test ERROR: python -m unittest discover ; The following error is reported. Can the clipper still be used normally HOT 3
- error on main.py HOT 2
- Issue processing bam file (index out of error) HOT 6
- error with clipper and scipy version
- Multiple fragmented peaks where single peak expected
- clipperhelper HOT 1
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from clipper.