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bioformats icon bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

dynamo icon dynamo

An event-driven particle simulator and visualisation code. Please see the website below for more information.

fortran_intro icon fortran_intro

Introduction to Modern Fortran for the University of Bristol

mdanalysis icon mdanalysis

MDAnalysis is a Python library to analyze molecular dynamics trajectories.

meep icon meep

free finite-difference time-domain (FDTD) software for electromagnetic simulations

msdanalyzer icon msdanalyzer

A MATLAB class for Mean Square Displacement analysis.

pims icon pims

Python Image Sequence: Load video and sequential images in many formats with a simple, consistent interface.

pyknotid icon pyknotid

A Python package for analysing knots and links, in space-curves or from standard topological notations

quip icon quip

libAtoms/QUIP molecular dynamics framework: http://www.libatoms.org

sire icon sire

Sire Molecular Simulations Framework

tcc icon tcc

The Topological Cluster Classification algorithm

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