Comments (1)
You should rely on the new version.
Old version has some issues due to inaccurate reactome.db
. ReactomePA
itself has no problem.
from reactomepa.
Related Issues (20)
- No gene can be mapped, return NULL HOT 2
- gnutls_handshake() failed: Handshake failed HOT 3
- Cannot change cnetplot edge thickness and color HOT 2
- install issue HOT 1
- Cannot extract results from enrichPathway HOT 4
- Working with more than one gene list HOT 1
- one gene kills the pathway HOT 2
- "No gene can be mapped" when running enrichPathway HOT 4
- enrichPathway
- NO plot output + enrichPathway error HOT 1
- support for plants? HOT 1
- organism avaialble?
- WES data
- No gene can be mapped with gsePathway HOT 2
- Difference between Kobas-i, Reactome website and ReactomePA (may caused by duplicated background genes)
- Specify minimal package versions in the Description file HOT 2
- Support non decreasing sorts in reactome pathway analysis
- ReactomePA plot label text overlap
- P-value correction for multiple testing necessary?
- can Arabidopsis run this function?
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from reactomepa.