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2dcs_fiberstrain

3dunetcnn

Keras 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

adversarialnetspapers

The classical papers and codes about generative adversarial nets

arrshow

arrayShow: A Matlab image viewer for multidimensional complex data (e.g. MRI images)

bart

BART: Toolbox for Computational Magnetic Resonance Imaging

ciml

A Course in Machine Learning

class2015

Examples used in the classes.

clearswi.jl

improved susceptibility weighted imaging using multi-echo aquisitions

conjugate-gradient-method-

coursera-neural-net

Assignments for Geoffrey Hinton's Neural Net Course on Coursera, translated from (gross)Matlab into (beautiful)Python.

cs231n

cs231n-1

斯坦福 cs231n 作业代码实践

cs_moco_lab

Compressed Sensing and Motion Correction LAB: An MR acquisition and reconstruction system

csgm

Code to reproduce results from the paper: "Compressed Sensing using Generative Models".

dagan

The implementation code for "DAGAN: Deep De-Aliasing Generative Adversarial Networks for Fast Compressed Sensing MRI Reconstruction"

dcscn-super-resolution

A tensorflow implementation of "Fast and Accurate Image Super Resolution by Deep CNN with Skip Connection and Network in Network", a deep learning based Single-Image Super-Resolution (SISR) model.

deep-learning-papers-reading-roadmap

Deep Learning papers reading roadmap for anyone who are eager to learn this amazing tech!

deep-mri-reconstruction

Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: Implementation & Demo

deeplearninginmedicalimagingandmedicalimageanalysis

deeplearntoolbox

Matlab/Octave toolbox for deep learning. Includes Deep Belief Nets, Stacked Autoencoders, Convolutional Neural Nets, Convolutional Autoencoders and vanilla Neural Nets. Each method has examples to get you started.

densenet

DenseNet implementation in Keras

densenet_torch

Densely Connected Convolutional Networks, In CVPR 2017 (Best Paper Award).

dipy

DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.

dl-mri-water-fat-separation

dmipy

The open source toolbox for reproducible diffusion MRI-based microstructure estimation

dw-possum

Simulate realistic diffusion-weighted MR data

fattyriot

FattyRiot algorithm for separation of fat and water magnetic resonance images

focuss

research

gan

Resources and Implementations of Generative Adversarial Nets: GAN, DCGAN, WGAN, CGAN, InfoGAN

hmri-toolbox

A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)