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amplicon_analysis

Workflow for amplicon QC and analysis from fastq to vcf and coverage plots

bamdst

a lightweight bam file depth statistical tool

bbmap

(Not Offical) BBMap short read aligner, and other bioinformatic tools.

bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

burrows-wheeler-transform

bwt

String search using the Burrows-Wheeler transform

c_tools

bioinfo tools use C language

conpair

Concordance and contamination estimator for tumor–normal pairs

cpp-practice

cpp

cpp-tutorial-samples

C++ tutorial code samples for those who want to start learning the language

cppcon2014

Speaker materials from CppCon 2014

debugmutect2

code about Debugging Mutect2

demo

django

The Web framework for perfectionists with deadlines.

duplex-sequencing

fosmid_analyze

scripts for analyzing fosmid sequencing data

fpfilter-tool

fqtools

An efficient FASTQ manipulation suite

fullstackdevelopercourse

教你成为全栈工程师

gatk-protected

GATK Official Release Repository: contains the core MIT-licensed GATK framework, plus "protected" tools restricted to non-commercial use only

how-to-read-code

A talk about how to read source code

java-best-practices

Best practices in Coding, Designing and Architecting Java Applications

leetcode

:pencil: Python / C++ 11 Solutions of All 468 LeetCode Questions

literate

small script to compile python scripts into reports - literate programming wise - capture text and pylab output

machinelearningcourse

机器学习精简入门教程

thecodeship

Source of my blog discussing everything related to programming and software development. Built with Python's Django.

transvar

TransVar - multiway annotator for precision medicine

vcflib

a simple C++ library for parsing and manipulating VCF files, + many command-line utilities

weblogo

WebLogo 3: Sequence Logos redrawn