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3i-utils

My 3i SlideBook utilities

bioimagebook.github.io

An introduction to bioimage analysis - http://bioimagebook.github.io

bozon

Minimalist Drag & drop file sharing app (version 2.4 build 15)

cellpose

a generalist algorithm for cellular segmentation

cellprofiler

An open-source application for measuring phenotypes

cellprofiler-analyst

Software for exploring and analyzing large, high-dimensional image-derived data.

cellprofiler-plugins

My CellProfiler plugins

cellprofiler_plugins

My CellProfiler plugins

czitools_lite

This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python. In addition it also contains other useful utilities to visualize CZI images inside Napari.

ezwidgets

Automatically exported from code.google.com/p/ezwidgets

fine-uploader

Multiple file upload plugin with image previews, drag and drop, progress bars. S3 and Azure support, image scaling, form support, chunking, resume, pause, and tons of other features.

grisbi

A very functional personal financial management program with a reasonable set of homefinance features

gui_autoth_qupath

hoodloader2

16u2 Bootloader to reprogram 16u2 + 328/2560 with Arduino IDE

hrm

The Huygens Remote Manager is an open-source, efficient, multi-user web-based interface to the Huygens software by Scientific Volume Imaging for parallel batch deconvolutions.

hx711

An Arduino library to interface the Avia Semiconductor HX711 24-Bit Analog-to-Digital Converter (ADC) for Weight Scales.

imapsync

imaris

My Imaris plugins

indicator-crystalhd

Indicates the state of the Broadcom CrystalHD linux driver (BCM70012, BCM70015)

iocbio

Automatically exported from code.google.com/p/iocbio

libapt

An Open Source rewrite of the Thorlabs APT.dll based on the cross-platform libftdi1 library

libatrous

My "A trous" wavelet library with Python bindings.

maggottracer

Basic software for tracing maggot trajectories

manc_suplemental

Suplemental material for MANC

md2googleslides

Generate Google Slides from markdown

meschach

:beer: Fork of Meschach. Just add CMake integration - http://homepage.math.uiowa.edu/~dstewart/meschach ‎

micro-manager

Microscope control and image acquisition integrated with ImageJ.

micromanager-upstream

Micro-Manager Open Source Microscopy Software (http://valelab.ucsf.edu/~MM/MMwiki/). SVN-tracking Git repository

microremoteproject

mtt-umich

Automatically exported from code.google.com/p/mtt-umich