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analysis-wdls

Early stages of converting genome/analysis-workflows from CWL to WDL

analysis-workflows

MGI's Analysis Workflows and Pipelines managed by the BGA group.

angular2-for-beginners-starter

A beginner friendly playground for Getting Started with Angular, by the Angular University

bam-readcount

count DNA sequence reads in BAM files

bioinformatic-workflows

CWL workflows for bioinformatic analysis

bioutils

Bioinformatic utilities and one off scripts

civic-client

Web client for CIViC: Clinical Interpretations of Variants in Cancer

civic-server

Backend Server for CIViC Project

clonevol

Inferring and visualizing clonal evolution in multi-sample cancer sequencing

cloud-workflows

Infrastructure and tooling required to get genomic workflows running in the cloud

courses

Contains the Angular For Beginners Course, Angular Forms, Router and RxJs Jumpstart Courses

d3-book

Sample code files to accompany the book “Interactive Data Visualization for the Web”

dgi-db

Rails frontend to The Genome Institute's drug gene interaction database.

docker-agfusion

Docker image instructions for AGFusion

docker-annotation_table-cwl

docker-arcashla

arcasHLA docker image instructions

docker-ascatngs

Docker image instructions from ascatNGS

docker-bedops

Docker image instructions for bedops

docker-bedtools

Docker image instructions for bedtools

docker-bwa

bwa docker image instructions

docker-cle

Docker containerization for the CLE

docker-cnvkit

Docker image instructions for cnvkit

docker-delly

Docker image instructions for DELLY

docker-fastp

Docker image instructions for fastp

docker-fastqc

Docker image instructions for FastQC

docker-fgbio

Docker image for fgbio

docker-fragcounter

fragCounter docker image instructions

docker-gossamer

gossamer docker image instructions

docker-hisat2

Docker image instructions for hisat2

docker-hla-la

Docker image instructions for hla*la