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Construction of concatenated gene tree from BUSCO genes
Cenote-Taker2: Discover and Annotate Divergent Viral Contigs
Taxonomic classification of viruses at Order and Family level
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Extended tools for correlation analysis and visualization.
➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
A grammar of graphics for comparative genomics
A package for plotting maps in R with ggplot2
A User-Friendly Pipeline for the production of Core Genome and Concatenated Protein based Phylogenetic Trees and Protein based Comparative Genomic Analyses
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
Custom codes for the Groundwater Virome Database (GWVD)
Scripts and data for Sevigny et al. 2018. Marker genes as predictors of shared genomic function.
Scripts in support of publication
Using IDBA-ud, this is how we assemble metagenomic reads into scaffolds on different projects
A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations
Supporting code for uncultivated gut virus manuscript
Short python script designed to identify housekeeping genes in protein files, concatenate them, and create a MLST phylogeny
multiPhATE with comparative genomics
🐞 Convert NCBI taxonomy dump into lineages
A script that parses the OrthoFinder output and keeps only the orthogroups that meet specific criteria
A script to get from Orthogroups.GeneCount.tsv to a gene presence/absence binary alignment.
Annotates genes on putative phage contigs with protein orthologous groups using PHROGs
Assign taxonomic ranks based on evolutionary divergence.
百京大学燕园云战役自动填报小助手 Github Action
Creating plasmid maps inside ggplot.
Pipline for detecting viral sequences from RNA-seq data
VGEA (Viral Genomes Easily Analyzed) is a pipeline for analysis of RNA virus next-generation sequencing data.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.