zovoilis-lab Goto Github PK
Name: Zovoilis Lab
Type: Organization
Bio: Zovoilis Lab at the University of Manitoba
Location: Canada
Zovoilis Lab's Projects
bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
centrifuge
Classifier for metagenomic sequences
chiron
A basecaller for Oxford Nanopore Technologies' sequencers
dinopore
DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing
epinano
Detection of RNA modifications from Oxford Nanopore direct RNA sequencing reads
flappie
Flip-flop basecaller for Oxford Nanopore reads
flye_ppcle64
De novo assembler for single molecule sequencing reads using repeat graphs, modified to compile on ppcle64.
medaka
Sequence correction provided by ONT Research
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
na12878
Data and analysis for NA12878 genome on nanopore
nanocompore
RNA modifications detection from Nanopore dRNA-Seq data
nanopolish-ppc64le
Signal-level algorithms for MinION data
nanoseq
Nanopore demultiplexing, QC and alignment pipeline
prymetime
Pipeline for Recombinant Yeast genoMEs That Identifies Markers of Engineering
racon
Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
reditools
REDItools are python scripts to investigate RNA editing at genomic scale.
spoa
SIMD partial order alignment tool/library
taiyaki
Training models for basecalling Oxford Nanopore reads
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