This project forked from normjam/benchmark
Comparison of single-cell normalization methods using multiple datasets with ground-truth labels
License: MIT License
This repository defines a docker environment that contains R and Python kernels with the dependencies required to
run the benchmarking scripts. R dependencies are installed by packages.R and python dependencies are listed in
requirements.txt
Install Docker. Run, from the root of the repository:
> docker build -t normjam -f Dockerfile .
When docker is installed on your system, the following command will drop you into a bash shell that exposes R & python installed.
> docker run -it normjam
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