aced-idp Goto Github PK
Type: Organization
aced-idp's Projects
aced-idp.github.io
Documentation Site for the ACED Data Commons
aced_etl_pod
etl worker pod
aced_queries
Worked examples of ACED queries
arborist_users
Extract arborist entities[resource, role, policy, etc.] from current k8s context, create user.yaml
benchwarmer
Benchmarking tool used to test upload speeds of the gen3-client and S3-compatible storage endpoints
cdis-data-client
data access client
cloud-automation
Automation for standing up Gen3 commons
compose-services-training
Learn about Gen3 using Docker compose
data-portal
Windmill: data portal for metadata submission and query
data_model
Schema and synthetic data
devops
Playbooks and scripts
dictionaryutils
python wrapper and metaschema for datadictionary
dir_to_study
A utility to create a "bare bones" ResearchStudy with DocumentReference
fhir-example
A standalone FHIR service
g3t_etl
Transform submissions into FHIR
gen3-aws
Notes to accompany Gen3 AWS deployment (deprecated)
gen3-frontend-framework
A Frontend Framework for Gen3 data portals
gen3-helm
Helm charts for Gen3 Deployments
gen3-tests
Framework for release testing of Gen3 instances
gen3_util
Collection of command line tools to interact with a Gen3 instance
gen3sdk-python
Gen3 SDK for Python
mcf10a
LINCS MCF10A Molecular Deep Dive (MDD)
minio
Proof of concept - Minio based file service (deprecated)
minio-deploy
A collection of Ansible playbooks and instructions on Minio deployment
nvidia-collaboration
OHSU CEDAR Cyclic IF and H&E images
pelican
Sower jobs for PFB export & import
status-monitor
Uptime/downtime monitor and status page for ACED data commons
submission
Submit FHIR based data into a Gen3 Commons
tools-for-health-data-anonymization
Set of tools for helping with data (in FHIR format) anonymization.
ucl-certs
Add UCL Certs to linux / python environment
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