achalneupane Goto Github PK

achalneupane

angular-ice

apply_inheritance

bam-readcount

count DNA sequence reads in BAM files

bayesian_statistics

bitcoin

Bitcoin Core integration/staging tree

bitcoinbook

Mastering Bitcoin 2nd Edition - Programming the Open Blockchain

burden_test_cancer

cancereqtls

Code for cancer eQTL study

cftr-variant-classification-analysis

Files for the analysis of different variant classification tools using an artifically created set of variants in the CFTR gene

cleaveland4

CleaveLand4: Analysis of degradome data to find sliced miRNA and siRNA targets

clonevol

Inferring and visualizing clonal evolution in multi-sample cancer sequencing

cluster_wgs_data

R-function to implement the clustering algorithm described in Fier et al. (2017), On the association analysis of genome-sequencing data: A spatial clustering approach for partitioning the entire genome into non- overlapping windows, Genetic Epidemiology

common_analyses

Repository of common bioinformatics scripts

dailycryptoratings.com

data

dcc

DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.

docker

enhancedvolcano

Publication-ready volcano plots with enhanced colouring and labeling

finemap

Demos of SuSiE and FINEMAP.

gene_enrichment_snps

ggpubr

'ggplot2' Based Publication Ready Plots

ggrepel

:round_pushpin: Repel overlapping text labels away from each other.

gskat

:exclamation: This is a read-only mirror of the CRAN R package repository. gskat — GEE_KM

gwa_tutorial

A comprehensive tutorial about GWAS and PRS

hands-on-machine-learning

Contains Jupyter Notebooks/Resources provided by the author and my work on problem sets.

intervar

A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

machine-learning-with-r-datasets

Formatted datasets for Machine Learning With R by Brett Lantz

master_py_regex

Code for Mastering Python Regex book

meetup