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csf_serum_aptamers

csf_serum_somamers_analysis

csfaptamers_jp_em

dash-bio

Open-source bioinformatics components for Dash

data-police-shootings

The Washington Post is compiling a database of every fatal shooting in the United States by a police officer in the line of duty in 2015 and 2016.

data.gov

Data.gov source code and issue tracker

datasciencer

a curated list of R tutorials for Data Science, NLP and Machine Learning

dataset-examples

Samples for users of the Yelp Academic Dataset

dbg

Naive de Bruijn graph implementation in python

decombinator

Decombinator v3: fast, error-correcting analysis of TCR repertoires

deep-learning

Repo for the Deep Learning Nanodegree Foundations program.

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

deeplearningtutorials

Deep Learning Tutorial notes and code. See the wiki for more info.

deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

demuxlet

Genetic multiplexing of barcoded single cell RNA-seq

doc-annovar

Documentation for the ANNOVAR software

docusaurus

Easy to maintain open source documentation websites.

doubletdetection

Doublet detection in single-cell RNA-seq data.

dsb2017

Code for 2nd place solution to the 2017 National Data Science Bowl

ensembl-rest

Language agnostic RESTful data access to Ensembl data over HTTP

evachan.org-rscripts

Handy genetics-related R scripts

exome_1000g_wf

exome_seq_pipeline

Python based command execution of exome sequencing analysis on the stanford genomics cluster

facenet

Face recognition using Tensorflow

fashion-mnist

A MNIST-like fashion product database. Benchmark :point_right:

fast-style-transfer

TensorFlow CNN for fast style transfer! ⚡🖥🎨🖼

fastq-to-fasta

fastq_to_fasta

A python script to convert FASTQ to FASTA

fhir

FHIR Protocol Buffers

flash2

Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for amplicons