alartin Goto Github PK

glow

An open-source toolkit for large-scale genomic analysis

haplonet

Haplotype and population structure inference using neural networks.

happynet

Haplotype Block Based Dimensionality Reduction for Complex Variant-Disease Associations

learngit

learn git

loreta

medaka

Sequence correction provided by ONT Research

multitrait-nirs-model

Modeling of nutritional traits from multiple crops using NIRS and machine learning/statistics

nanovar

Structural variant caller for low-depth long-read sequencing data

nirs-protein-prediction

We present here a 1D convolutional neural network model to predict grain protein content using spectroscopic data of multiple cereals

pavian

Interactive analysis of metagenomics data

quast

Genome assembly evaluation tool

soybean_trait_prediction

Jupyter Notebooks for Code Used In Machine learning prediction models outperform deep learning models, provide interpretation and facilitate successful feature selection for soybean trait prediction

sparkbeagle

SparkBeagle: scalable distributed genotype imputation in the cloud

squigglekit

SquiggleKit: A toolkit for manipulating nanopore signal data

swissknife

Collection of scripts for genome analysis

tdnascan

TDNAscan: A Software to Identify Complete and Truncated T-DNA insertions

wdl-demo