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R code used for the master thesis entitled "Germline variants associated with prognosis of patients with non muscle invasive bladder cancer".

bladder-cancer gwas gwas-summary-statistics snps non-muscle-invasive-bladder-cancer survival-analysis

masterthesis's Introduction

GERMLINE VARIANTS ASSOCIATED WITH PROGNOSIS OF PATIENTS WITH NON MUSCLE INVASIVE BLADDER CANCER

Ane Moreno Oya

This is the repository of the Master Thesis of Ane Moreno Oya for the Master in Biostatistics.

It consists of 4 folders:

Cox PH

The R code for the analysis using Cox PH models.

lassosum

The R code for the Polygenic Risk Score using lassosum.

LASSO

The R code for the analysis using LASSO models.

Random Survival Forest

The R code for the analysis using Random Survival Forest.

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