anaphory / burstclock Goto Github PK
View Code? Open in Web Editor NEWModels, Paper and Data on the Semi-Strict Clock
Models, Paper and Data on the Semi-Strict Clock
We plan to move RandomTreeWithSA
here. In a random BEAST run for the burst clock, I just ran into
java.lang.NullPointerException
at beast.evolution.tree.RandomTreeWithSA.initStateNodes(Unknown Source)
at beast.evolution.tree.RandomTree.initAndValidate(Unknown Source)
at beast.evolution.tree.RandomTreeWithSA.initAndValidate(Unknown Source)
at beast.util.XMLParser.initBEASTObjects(Unknown Source)
at beast.util.XMLParser.parse(Unknown Source)
at beast.util.XMLParser.parseFile(Unknown Source)
at beast.app.BeastMCMC.parseArgs(Unknown Source)
at beast.app.beastapp.BeastMain.main(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at beast.app.beastapp.BeastLauncher.run(Unknown Source)
at beast.app.beastapp.BeastLauncher.main(Unknown Source)
I have not seen it before, so it seems to be a very low probability random error, and the error message is missing the line where it happens, so it may be really difficult to debug. But it happened, so here is an issue about it.
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