Please define a next (2.1.0?) milestone and shuffle issues into it

[antsx]

Please define a next (2.1.0?) milestone and shuffle issues into it

[stnava]

yes, I think we can do something for you soon.

hopefully we can synchronize this with a couple of papers that should be
settled in the next couple of weeks
On Mar 20, 2014 10:57 PM, "Yaroslav Halchenko" [email protected]
wrote:

to get a clue if next release is coming some time soon ;)

Reply to this email directly or view it on GitHubhttps://github.com//issues/79
.

[stnava]

okay, now might be a good time for a new ants release following on the
heels of the latest itk release and our various frontiers publications

I would like to get the documentation ants PDF updated before doing this.

does anyone have thoughts or requests for this release?
On Mar 20, 2014 9:39 PM, "brian avants" [email protected] wrote:

yes, I think we can do something for you soon.

hopefully we can synchronize this with a couple of papers that should be
settled in the next couple of weeks
On Mar 20, 2014 10:57 PM, "Yaroslav Halchenko" [email protected]
wrote:

to get a clue if next release is coming some time soon ;)

Reply to this email directly or view it on GitHubhttps://github.com//issues/79
.

[armaneshaghi]

Not really sure if it is a real need for others as well, but I think there
won't be any harm in expressing this:

When it comes to hypointense lesions of T1-weighted scans, lesion filling
is a real need for special patient populations. This was addressed last
year in FSL with a script that takes lesion maps and fills inside the
lesions with neighboring "normal" voxels. I have a fairly simple script for
my personal usage in ANTsR
https://github.com/armaneshaghi/rlesfill/blob/master/lesion_filling.R (this
needs a lot of refinement). Really happy to work on this as part of next
release if there is a real interest in it.

On Fri, Apr 11, 2014 at 9:28 PM, stnava [email protected] wrote:

okay, now might be a good time for a new ants release following on the
heels of the latest itk release and our various frontiers publications

I would like to get the documentation ants PDF updated before doing this.

does anyone have thoughts or requests for this release?

On Mar 20, 2014 9:39 PM, "brian avants" [email protected] wrote:

yes, I think we can do something for you soon.

hopefully we can synchronize this with a couple of papers that should be
settled in the next couple of weeks
On Mar 20, 2014 10:57 PM, "Yaroslav Halchenko" <[email protected]

wrote:

to get a clue if next release is coming some time soon ;)

Reply to this email directly or view it on GitHub<
https://github.com/stnava/ANTs/issues/79>

.

Reply to this email directly or view it on GitHubhttps://github.com//issues/79#issuecomment-40225708
.

[stnava]

hi arman - have you worked further on this? am curious about what you have found ....

[armaneshaghi]

Hi Brian, the best and the newest is actually here http://www.sciencedirect.com/science/article/pii/S2213158214001259

My code above is a real mess which works for me, however, I did not receive any feedback at the time to work on this further to make it re-usable for others, but if you think that it could be a worthwhile PR, I could do this inside ITK and ANTs (instead of ANTsR).

[stnava]

hi arman - @dorianps might be able to contribute to this ... at least he can test the ANTsR version and get back to you ...

[armaneshaghi]

new issue is released today, I have compiled it on redhat and debian machines, and will also upload a Yosemite version. Please see github releases page.

[yarikoptic]

Great -- thanks @armaneshaghi

[armaneshaghi]

Do we need to do anything for Neurodebian?

On Fri, Jan 23, 2015 at 5:23 PM, Yaroslav Halchenko <
[email protected]> wrote:

Great -- thanks @armaneshaghi https://github.com/armaneshaghi

Reply to this email directly or view it on GitHub
#79 (comment).

[yarikoptic]

On Fri, 23 Jan 2015, Arman Eshaghi wrote:

Do we need to do anything for Neurodebian?

thanks for asking!

what is minimal ITK version I would need?

build fails for me on debian sid
http://www.onerussian.com/tmp/ants-2.1.0-debian-build.log
having

ii libinsighttoolkit4-dev 4.6.0-3+b2 i386

here is the initial error:

[ 4%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o
cd /home/yoh/deb/gits/pkg-exppsy/ants/obj-i586-linux-gnu/Examples && /usr/lib/ccache/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -g -O0 -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -I/home/yoh/deb/gits/pkg-exppsy/ants/obj-i586-linux-gnu/Examples -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/. -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Temporary -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Tensor -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../GraphTheory -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../ImageSegmentation -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../ImageRegistration -I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Utilities -I/home/yoh/deb/gits/pkg-exppsy/ants/obj-i586-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/build/insighttoolkit4-BJt_oq/insighttoolkit4-4.6.0/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/dcmtk -I/usr/include/dcmtk/oflog -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/dcmtls -I/usr/include/dcmtk/dcmsr -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmpstat -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/config -I/usr/include/i386-linux-gnu -I/usr/include/gdcm-2.4 -I/usr/include/ITK-4.6 -o CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o -c /home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration3DFloat.cxx
In file included from /home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.h:1120:0,
from /home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistrationTemplateHeader.h:14,
from /home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration2DDouble.cxx:1:
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx: In instantiation of 'int ants::RegistrationHelper<TComputeType, VImageDimension>::DoRegistration() [with TComputeType = double; unsigned int VImageDimension = 2u]':
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistrationTemplateHeader.h:970:35: required from 'int ants::DoRegistration(itk::ants::CommandLineParser::Pointer&) [with TComputeType = double; unsigned int VImageDimension = 2u; itk::ants::CommandLineParser::Pointer = itk::SmartPointeritk::ants::CommandLineParser]'
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration2DDouble.cxx:8:46: required from here
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx:1278:13: error: 'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double, 2u>, itk::Image<double, 2u>, itk::AffineTransform<double, 2u>, itk::Image<double, 2u> > >::ObjectType' has no member named 'SetFixedPointSet'
affineRegistration->SetFixedPointSet( n, stageMetricList[n].m_FixedPointSet.GetPointer() );
^
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx:1279:13: error: 'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double, 2u>, itk::Image<double, 2u>, itk::AffineTransform<double, 2u>, itk::Image<double, 2u> > >::ObjectType' has no member named 'SetMovingPointSet'
affineRegistration->SetMovingPointSet( n, stageMetricList[n].m_MovingPointSet.GetPointer() );

[armaneshaghi]

I used ITK current master without any problems on Debian Jessie. Will
upload the binary to github release page in a few minutes...

On Fri, Jan 23, 2015 at 8:55 PM, Yaroslav Halchenko <
[email protected]> wrote:

On Fri, 23 Jan 2015, Arman Eshaghi wrote:

Do we need to do anything for Neurodebian?

thanks for asking!

what is minimal ITK version I would need?

build fails for me on debian sid
http://www.onerussian.com/tmp/ants-2.1.0-debian-build.log
having

ii libinsighttoolkit4-dev 4.6.0-3+b2 i386

here is the initial error:

[ 4%] Building CXX object
Examples/CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o
cd /home/yoh/deb/gits/pkg-exppsy/ants/obj-i586-linux-gnu/Examples &&
/usr/lib/ccache/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -g -O0
-fstack-protector-strong -Wformat -Werror=format-security -Wall
-Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch
-Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings
-funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof
-Woverloaded-virtual -Wstrict-null-sentinel -fPIC
-I/home/yoh/deb/gits/pkg-exppsy/ants/obj-i586-linux-gnu/Examples
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/.
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Temporary
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Tensor
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../GraphTheory
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../ImageSegmentation
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../ImageRegistration
-I/home/yoh/deb/gits/pkg-exppsy/ants/Examples/../Utilities
-I/home/yoh/deb/gits/pkg-exppsy/ants/obj
-i586-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial
-I/build/insighttoolkit4-BJt_oq/insighttoolkit4-4.6.0/BUILD/Modules/ThirdParty/HDF5/src
-I/usr/include/dcmtk -I/usr/include/dcmtk/oflog -I/usr/include/dcmtk/ofstd
-I/usr/include/dcmtk/dcmtls -I/usr/include/dcmtk/dcmsr
-I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmqrdb
-I/usr/include/dcmtk/dcmpstat -I/usr/include/dcmtk/dcmnet
-I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg
-I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmimage
-I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/config
-I/usr/include/i386-linux-gnu -I/usr/include/gdcm-2.4
-I/usr/include/ITK-4.6 -o
CMakeFiles/antsUtilities.dir/antsRegistration3DFloat.cxx.o -c
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration3DFloat.cxx
In file included from
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.h:1120:0,

from
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistrationTemplateHeader.h:14,

from
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration2DDouble.cxx:1:
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx:
In instantiation of 'int ants::RegistrationHelper<TComputeType,
VImageDimension>::DoRegistration() [with TComputeType = double; unsigned
int VImageDimension = 2u]':
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistrationTemplateHeader.h:970:35:
required from 'int
ants::DoRegistration(itk::ants::CommandLineParser::Pointer&) [with
TComputeType = double; unsigned int VImageDimension = 2u;
itk::ants::CommandLineParser::Pointer =
itk::SmartPointeritk::ants::CommandLineParser]'
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/antsRegistration2DDouble.cxx:8:46:
required from here
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx:1278:13:
error: 'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double,
2u>, itk::Image<double, 2u>, itk::AffineTransform<double, 2u>,
itk::Image<double, 2u> > >::ObjectType' has no member named
'SetFixedPointSet'
affineRegistration->SetFixedPointSet( n,
stageMetricList[n].m_FixedPointSet.GetPointer() );
^
/home/yoh/deb/gits/pkg-exppsy/ants/Examples/itkantsRegistrationHelper.hxx:1279:13:
error: 'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double,
2u>, itk::Image<double, 2u>, itk::AffineTransform<double, 2u>,
itk::Image<double, 2u> > >::ObjectType' has no member named
'SetMovingPointSet'
affineRegistration->SetMovingPointSet( n,
stageMetricList[n].m_MovingPointSet.GetPointer() );

Reply to this email directly or view it on GitHub
#79 (comment).

[yarikoptic]

On Fri, 23 Jan 2015, Arman Eshaghi wrote:

I used ITK current master without any problems on Debian Jessie. Will
upload the binary to github release page in a few minutes...

I am building off v2.1.0 tag with my debian/ on top, without superbuild, i.e. with options

            -DANTS_SUPERBUILD:BOOL=OFF \
            -DANTS_USE_GIT_PROTOC:BOOL=OFF \
            -DCOPY_SCRIPT_FILES_TO_BIN_DIR:BOOL=OFF \
            -DCMAKE_SKIP_RPATH:BOOL=OFF \
            -DUSE_SYSTEM_ITK:BOOL=ON \
            -DUSE_VTK:BOOL=OFF \
            -DBUILD_SHARED_LIBS:BOOL=ON \
            -DRUN_SHORT_TESTS:BOOL=ON \
            -DRUN_LONG_TESTS:BOOL=OFF \
            -DEXECUTABLE_OUTPUT_PATH:PATH=$(DESTBINDIR) \
            --debug-output

and tried again in a fresh clean jessie i386 using

sudo apt-get install fakeroot; git clone git://github.com/neurodebian/ANTs -b debian; cd ANTs; fakeroot debian/rules binary

with the same result:

[ 1%] Building CXX object Examples/CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o
cd /tmp/ANTs/obj-i586-linux-gnu/Examples && /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Woverloaded-virtual -Wstrict-null-sentinel -fPIC -I/tmp/ANTs/obj-i586-linux-gnu/Examples -I/tmp/ANTs/Examples/. -I/tmp/ANTs/Examples/../Temporary -I/tmp/ANTs/Examples/../Tensor -I/tmp/ANTs/Examples/../GraphTheory -I/tmp/ANTs/Examples/../ImageSegmentation -I/tmp/ANTs/Examples/../ImageRegistration -I/tmp/ANTs/Examples/../Utilities -I/tmp/ANTs/obj-i586-linux-gnu/ITKIOFactoryRegistration -I/usr/include/hdf5/serial -I/build/insighttoolkit4-BJt_oq/insighttoolkit4-4.6.0/BUILD/Modules/ThirdParty/HDF5/src -I/usr/include/dcmtk -I/usr/include/dcmtk/oflog -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/dcmtls -I/usr/include/dcmtk/dcmsr -I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmqrdb -I/usr/include/dcmtk/dcmpstat -I/usr/include/dcmtk/dcmnet -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/config -I/usr/include/i386-linux-gnu -I/usr/include/gdcm-2.4 -I/usr/include/ITK-4.6 -o CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o -c /tmp/ANTs/Examples/antsRegistration2DDouble.cxx
In file included from /tmp/ANTs/Examples/itkantsRegistrationHelper.h:1120:0,
from /tmp/ANTs/Examples/antsRegistrationTemplateHeader.h:14,
from /tmp/ANTs/Examples/antsRegistration2DDouble.cxx:1:
/tmp/ANTs/Examples/itkantsRegistrationHelper.hxx: In instantiation of 'int ants::RegistrationHelper<TComputeType, VImageDimension>::DoRegistration() [with TComputeType = double; unsigned int VImageDimension = 2u]':
/tmp/ANTs/Examples/antsRegistrationTemplateHeader.h:970:35: required from 'int ants::DoRegistration(itk::ants::CommandLineParser::Pointer&) [with TComputeType = double; unsigned int VImageDimension = 2u; itk::ants::CommandLineParser::Pointer = itk::SmartPointeritk::ants::CommandLineParser]'
/tmp/ANTs/Examples/antsRegistration2DDouble.cxx:8:47: required from here
/tmp/ANTs/Examples/itkantsRegistrationHelper.hxx:1278:13: error: 'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double, 2u>, itk::Image<double, 2u>, itk::AffineTransform<double, 2u>, itk::Image<double, 2u> > >::ObjectType' has no member named 'SetFixedPointSet'
affineRegistration->SetFixedPointSet( n, stageMetricList[n].m_FixedPointSet.GetPointer() );

[stnava]

Probably need itk 4.7 , possibly development itk ....
On Jan 23, 2015 3:13 PM, "Yaroslav Halchenko" [email protected]
wrote:

On Fri, 23 Jan 2015, Arman Eshaghi wrote:

I used ITK current master without any problems on Debian Jessie. Will
upload the binary to github release page in a few minutes...

I am building off v2.1.0 tag with my debian/ on top, without superbuild,
i.e. with options

-DANTS_SUPERBUILD:BOOL=OFF
-DANTS_USE_GIT_PROTOC:BOOL=OFF
-DCOPY_SCRIPT_FILES_TO_BIN_DIR:BOOL=OFF
-DCMAKE_SKIP_RPATH:BOOL=OFF
-DUSE_SYSTEM_ITK:BOOL=ON
-DUSE_VTK:BOOL=OFF
-DBUILD_SHARED_LIBS:BOOL=ON
-DRUN_SHORT_TESTS:BOOL=ON
-DRUN_LONG_TESTS:BOOL=OFF
-DEXECUTABLE_OUTPUT_PATH:PATH=$(DESTBINDIR)
--debug-output

and tried again in a fresh clean jessie i386 using

sudo apt-get install fakeroot; git clone git://github.com/neurodebian/ANTs
-b debian; cd ANTs; fakeroot debian/rules binary

with the same result:

[ 1%] Building CXX object
Examples/CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o
cd /tmp/ANTs/obj-i586-linux-gnu/Examples && /usr/bin/c++
-DITK_IO_FACTORY_REGISTER_MANAGER -g -O2 -fstack-protector-strong -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -Wall -Wcast-align
-Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch
-Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings
-funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof
-Woverloaded-virtual -Wstrict-null-sentinel -fPIC
-I/tmp/ANTs/obj-i586-linux-gnu/Examples -I/tmp/ANTs/Examples/.
-I/tmp/ANTs/Examples/../Temporary -I/tmp/ANTs/Examples/../Tensor
-I/tmp/ANTs/Examples/../GraphTheory
-I/tmp/ANTs/Examples/../ImageSegmentation
-I/tmp/ANTs/Examples/../ImageRegistration -I/tmp/ANTs/Examples/../Utilities
-I/tmp/ANTs/obj-i586-linux-gnu/ITKIOFactoryRegistration
-I/usr/include/hdf5/serial
-I/build/insighttoolkit4-BJt_oq/insighttoolkit4-4.6.0/BUILD/Modules/ThirdParty/HDF5/src
-I/usr/include/dcmtk -I/usr/include/dcmtk/oflog -I/usr/include/dcmtk/ofst d
-I/usr /include/dcmtk/dcmtls -I/usr/include/dcmtk/dcmsr
-I/usr/include/dcmtk/dcmsign -I/usr/include/dcmtk/dcmqrdb
-I/usr/include/dcmtk/dcmpstat -I/usr/include/dcmtk/dcmnet
-I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/dcmjpeg
-I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmimage
-I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/config
-I/usr/include/i386-linux-gnu -I/usr/include/gdcm-2.4
-I/usr/include/ITK-4.6 -o
CMakeFiles/antsUtilities.dir/antsRegistration2DDouble.cxx.o -c
/tmp/ANTs/Examples/antsRegistration2DDouble.cxx
In file included from
/tmp/ANTs/Examples/itkantsRegistrationHelper.h:1120:0,
from /tmp/ANTs/Examples/antsRegistrationTemplateHeader.h:14,
from /tmp/ANTs/Examples/antsRegistration2DDouble.cxx:1:
/tmp/ANTs/Examples/itkantsRegistrationHelper.hxx: In instantiation of 'int
ants::RegistrationHelper<TComputeType, VImageDimension>::DoRegistration()
[with TComputeType = double; unsigned int VImageDimension = 2u]':
/tmp/ANTs/Examples/antsRegistrationTemplateHeader.h:970:35: required from
'int ants::DoRegistration(itk::ants::CommandLineParser::Pointer&) [with
TComputeType = double; unsigned int VImageDimension = 2u;
itk::ants::CommandLineParser::Pointer =
itk::SmartPointeritk::ants::CommandLineParser]'
/tmp/ANTs/Examples/antsRegistration2DDouble.cxx:8:47: required from here
/tmp/ANTs/Examples/itkantsRegistrationHelper.hxx:1278:13: error:
'itk::SmartPointer<itk::ImageRegistrationMethodv4<itk::Image<double, 2u>,
itk::Image<double, 2u>, itk::AffineTransform<double, 2u>,
itk::Image<double, 2u> > >::ObjectType' has no member named
'SetFixedPointSet'
affineRegistration->SetFixedPointSet( n,
stageMetricList[n].m_FixedPointSet.GetPointer() );

—
Reply to this email directly or view it on GitHub
#79 (comment).

[yarikoptic]

github ate my last email reply again...

Probably need itk 4.7 , possibly development itk ....

ah -- the no go for debian folks atm :-/

I have filed a bug report to seek 4.7 packaged for Debian (experimental) and we might then provide backports from neurodebian.

could someone check if it is at least compatible with it and doesn't require development version?

[stnava]

OK ... iterate a couple more times and this should be worked out for the
longer term.
On Jan 23, 2015 9:21 PM, "Yaroslav Halchenko" [email protected]
wrote:

github ate my last email reply again...

Probably need itk 4.7 , possibly development itk ....

ah -- the no go for debian folks atm :-/

I have filed a bug report to seek 4.7 packaged for Debian (experimental)
and we might then provide backports from neurodebian.

could someone check if it is at least compatible with it and doesn't
require development version?

—
Reply to this email directly or view it on GitHub
#79 (comment).

[yarikoptic]

not sure if I grasped exactly what was the "this" someone should iterate and then it must be worked out: emails to github or builds for debian ;-)