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Anthony Underwood's Projects

eschaton icon eschaton

the original gangsta of google maps on rails

event_calendar icon event_calendar

Show multiple, overlapping events across calendar days and rows. Rails plugin.

fetchngs icon fetchngs

Pipeline to fetch metadata and raw FastQ files from public and private databases

gdata4ruby icon gdata4ruby

GData4Ruby is a wrapper for the generic Google Data services

hamronization icon hamronization

Parse multiple Antimicrobial Resistance Analysis Reports into a common data structure

hladownload icon hladownload

A tool for downloading HLA alleles, epitopes and frequencies

kaiju icon kaiju

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

kidsruby icon kidsruby

KidsRuby is a Ruby programming environment meant for kids to learn and have fun!

minimal icon minimal

Minimal is a Jekyll theme for GitHub Pages

mlstar icon mlstar

An easy way of MLSTyping your genomes in R.

modules icon modules

Repository to host tool-specific module files for the Nextflow DSL2 community!

momps icon momps

Whole genome sequencing (WGS) has revolutionized the subtyping of L. pneumophila (Lp) but calling the traditional sequence based type from genomic data is hampered by presence of multiple copies of the mompS locus. We propose a novel bioinformatics solution for rectifying that limitation, ensuring the feasibility of WGS for cluster investigation.

mulled icon mulled

Mulled - Automatized Containerized Software Repository

nf-core-bactmap icon nf-core-bactmap

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

onebody icon onebody

private member portal for churches, built with Ruby on Rails

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