arnauddhaene/tagflow

Automated myocardial strain estimation from tagged MR images

tagflow

Automated myocardial strain estimation using tagged MR images

Dependencies

The dependencies are included in requirements.txt and packages.txt

Web-app

Simply run

streamlit run app.py

Running the code

The folder structure should be as followed:

├── .github/workflows    <- GitHub Actions linter
├── tagflow              <- Automated tracking web-app src
|   ├── models           <- Neural Network architecture
|   ├── network_saves    <- Checkpointed Neural Networks
|   ├── src              <- Source files
|   ├── widgets          <- Streamlit widgets
|   └── ...              <- Streamlit web-app pages
├── dashboard.py         <- Main file for Streamlit web-app
├── packages.txt         <- Package dependencies for Streamlit Cloud
├── README.md            <- The file you are currently reading
├── requirements.txt     <- Dependencies
└── tox.ini              <- Linting instructions