More of an ask than anything else at this point, but I was simply wondering if the WARNINGs as shown below were expected, or if this was possibly due to change of defaults from GitHub. If so, I am thinking GitGoat may have broken "features".
$ docker run -ti --env github_token=$GITGOAT_GH_TOKEN --rm ghcr.io/arnica-ext/gitgoat:main python3 run.py --org madchap-gitgoat
Repos: 100%|███████████████████████████████████████████████████████████████| 9/9 [00:12<00:00, 1.37s/it]
Actions: 0%| | 0/7 [00:00<?, ?it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Wasabi/actions/permissions is 409. Message: {"message":"Conflict","errors":"GitHub Actions is disabled on this repository by the organization","documentation_url":"https://docs.github.com/rest/reference/actions#set-github-actions-permissions-for-a-repository"}
Actions: 100%|█████████████████████████████████████████████████████████████| 7/7 [00:04<00:00, 1.51it/s]
Members: 100%|█████████████████████████████████████████████████████████████| 5/5 [00:03<00:00, 1.59it/s]
Parent Teams: 100%|████████████████████████████████████████████████████████| 3/3 [00:03<00:00, 1.24s/it]
Teams: 100%|███████████████████████████████████████████████████████████████| 9/9 [01:04<00:00, 7.22s/it]
Direct Permission: 100%|███████████████████████████████████████████████████| 5/5 [00:02<00:00, 1.91it/s]
Commits for miker-gg: 0it [00:00, ?it/s]
Commits for archiet-gg: 100%|██████████████████████████████████████████████| 7/7 [00:22<00:00, 3.25s/it]
Commits for billdp-gg: 100%|███████████████████████████████████████████████| 7/7 [00:27<00:00, 3.92s/it]
Commits for codeyf-gg: 100%|███████████████████████████████████████████████| 8/8 [00:32<00:00, 4.05s/it]
Commits for debu-gg: 100%|█████████████████████████████████████████████████| 1/1 [00:04<00:00, 4.53s/it]
Members Review PRs: 100%|██████████████████████████████████████████████████| 5/5 [00:33<00:00, 6.65s/it]
Owner Reviews PRs: 100%|███████████████████████████████████████████████████| 9/9 [00:06<00:00, 1.49it/s]
Members Merge PRs: 0%| | 0/5 [00:00<?, ?it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Lavender/pulls/2/merge is 405. Message: {"message":"Base branch was modified. Review and try the merge again.","documentation_url":"https://docs.github.com/rest/reference/pulls#merge-a-pull-request"}
WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Chamomile/pulls/1/merge is 405. Message: {"message":"Base branch was modified. Review and try the merge again.","documentation_url":"https://docs.github.com/rest/reference/pulls#merge-a-pull-request"}
WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Ginger/pulls/2/merge is 405. Message: {"message":"Base branch was modified. Review and try the merge again.","documentation_url":"https://docs.github.com/rest/reference/pulls#merge-a-pull-request"}
WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Wasabi/pulls/2/merge is 405. Message: {"message":"Base branch was modified. Review and try the merge again.","documentation_url":"https://docs.github.com/rest/reference/pulls#merge-a-pull-request"}
Members Merge PRs: 100%|███████████████████████████████████████████████████| 5/5 [00:32<00:00, 6.43s/it]
Branch Protection: 0%| | 0/9 [00:00<?, ?it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Lavender/branches/main/protection is 403. Message: {"message":"Upgrade to GitHub Pro or make this repository public to enable this feature.","documentation_url":"https://docs.github.com/rest/branches/branch-protection#update-branch-protection"}
Branch Protection: 22%|███████████▎ | 2/9 [00:00<00:02, 2.80it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Calendula/branches/main/protection is 403. Message: {"message":"Upgrade to GitHub Pro or make this repository public to enable this feature.","documentation_url":"https://docs.github.com/rest/branches/branch-protection#update-branch-protection"}
Branch Protection: 44%|██████████████████████▋ | 4/9 [00:01<00:01, 3.05it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Ginger/branches/main/protection is 403. Message: {"message":"Upgrade to GitHub Pro or make this repository public to enable this feature.","documentation_url":"https://docs.github.com/rest/branches/branch-protection#update-branch-protection"}
Branch Protection: 67%|██████████████████████████████████ | 6/9 [00:02<00:01, 2.92it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Peppermint/branches/main/protection is 403. Message: {"message":"Upgrade to GitHub Pro or make this repository public to enable this feature.","documentation_url":"https://docs.github.com/rest/branches/branch-protection#update-branch-protection"}
Branch Protection: 89%|█████████████████████████████████████████████▎ | 8/9 [00:02<00:00, 2.87it/s]WARNING:root:The response code for the PUT endpoint /repos/madchap-gitgoat/Acai/branches/main/protection is 403. Message: {"message":"Upgrade to GitHub Pro or make this repository public to enable this feature.","documentation_url":"https://docs.github.com/rest/branches/branch-protection#update-branch-protection"}
Branch Protection: 100%|███████████████████████████████████████████████████| 9/9 [00:03<00:00, 2.65it/s]
CODEOWNERS: 100%|██████████████████████████████████████████████████████████| 9/9 [00:12<00:00, 1.37s/it]