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krtd-binning

ksw2

Global alignment and alignment extension

lab2

lab3

manubot-rootstock

Clone me to create your manuscript

marvel

The MARVEL assembler

metagenomicdc

mlxtend

A library of extension and helper modules for Python's data analysis and machine learning libraries.

mmseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

ncd-lambda

nim

Nim is a statically typed compiled systems programming language. It combines successful concepts from mature languages like Python, Ada and Modula. Its design focuses on efficiency, expressiveness, and elegance (in that order of priority).

nimeasyga

A friendly genetic algorithm library for Nim

ntseq

JavaScript (node + browser) bioinformatics library for nucleotide sequence manipulation and analysis.

oeb278-paper

pandoc-scholar

Create beautiful and semantically meaningful articles with pandoc.

pint

Operate and manipulate physical quantities in Python

plos

A PLOS template for Quarto

pygraphviz

Python interface to Graphviz graph drawing package

python-guide

Python best practices guidebook, written for humans.

python-measurement

Use and manipulate unit-aware measurement objects in Python

quarto-oxford-thesis

A Quarto template for Oxford DPhil theses

reformat.js

javascript bioinformatics format converter

riboviria.org

Source code for riboviria.org

setup.py

📦 A Human's Ultimate Guide to setup.py.

squiggle

📈 DNA Sequence Visualization for Humans

squiggle_web

Web implementation of the Squiggle DNA Sequence Visualization

supabase

The open source Firebase alternative. Follow to stay updated about our public Beta.

textlint-rule-one-sentence-per-line

A fixable textlint rule to add a line break after each sentence

timestamp

A simple method of generating timestamps for my Zettelkasten

vdsearch

Viroid-like circRNA discovery and analysis suite