Comments (5)
Great, thank you for the quick reponse!
For the meantime I was just installing [email protected]
explicity, but having it solved in a newer version is a better solution.
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Additionally covered by 22667dc.
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Thanks for the report! You're right, we messed up with semver. In the short-term, you can do but @jakobnissen is working on making a new release of Automa that rolls back the break. BioJulia/Automa.jl#76] add XAM#hotfix-kb
,
EDIT: Actually, my fix isn't working
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OK, fixed that branch, so you can use that in the immediate term, but new version of Automa with breaking code removed was just tagged. JuliaRegistries/General#32895
Once that's merged (should be soon) you can just do ] up
and get back to working. Sorry for the inconvenience!
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Closing this for now, but do let us know if either of these solutions doesn't work for you.
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Related Issues (20)
- Error when opening a BAM file generated by HISAT2 version 2.2.0 HOT 3
- Various spec violations HOT 3
- Converge SAM and BAM records HOT 3
- Migrate from BGZFStreams to CodecBGZF HOT 2
- BoundsError in eachoverlap() HOT 14
- Browsing the documentation HOT 1
- TagBot trigger issue HOT 5
- can you add some functions to BAM.Reader? HOT 2
- Position of unmapped mate
- Install ERROR: Unsatisfiable requirements detected for package BioSequences HOT 2
- Make `seqname` consistent with BioJulia ecosystem
- how to use @threads to use multithreads when reading BAM file HOT 2
- Feature Request: Conversion from `BioAlignments` to `SAM.Record`
- Finding a map between observed bases and positions in the reference genome HOT 4
- eachoverlap running past end of stream
- Add `index!(reader::Reader, path)`
- Do you have the plan to add the pileup functions? HOT 8
- Switch to Oneflow HOT 3
- Correct way to add records to an array HOT 1
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