bobpxx/technical-notes

Technical notes about debug, installing,...

Technical-notes

"error in ms_deformable_im2col_cuda: no kernel image is available for execution on the device" when applying deformable attention.

Solution: When the GPU architecture is too new or old, this error happens. We need to specify the GPU architecture in setup.py. For example, for my 3080Ti, I add "-arch=sm_86","-gencode=arch=compute_86,code=sm_86" to extra_compile_args["nvcc"]

        extra_compile_args["nvcc"] = [
            "-DCUDA_HAS_FP16=1",
            "-D__CUDA_NO_HALF_OPERATORS__",
            "-D__CUDA_NO_HALF_CONVERSIONS__",
            "-D__CUDA_NO_HALF2_OPERATORS__",
            "-arch=sm_86",
            "-gencode=arch=compute_86,code=sm_86", #for too new GPU architecture (e.g., 3080Ti), we need to mannually specify the target GPU architecture
        ]

（check GPU architecture here: https://qiita.com/k_ikasumipowder/items/1142dadba01b42ac6012）

Check GPU-related info

python -c "import torch; print(torch.cuda.is_available())"

pip show torch | grep Location
python /location/torch/utils/collect_env.py

conda pack env

preparasion

conda create -name env_name python=3.x
conda activate env_name
# install dependencies
(pip install conda-pack)
conda pack -n env_name

use:

mkdir env_name
tar -xzf env_name.tar.gz -C env_name
source env_name/bin/activate

git

(git config --local lfs.url <lfs_URL>)
git (lfs) clone <URL>
cd <folder>
(git branch)
(git checkout -b <Branch>)
# work here
git add .
(git status)
git commit -m ""
git (lfs) push (origin <Branch>)

Tensorboard

LOCAL

ssh -N -f -L localhost:16045:127.0.0.1:8686 [email protected]

REMOTE

tensorboard --logdir=/mnt/lustre/partner/panxiuxi/data_communities/latent-diffusion/logs/ --port 8686

OPEN IN LOCAL

http://127.0.0.1:16045

cuda-torch version matching

https://pytorch.org/get-started/previous-versions/

Install opencv3

conda install -c https://conda.anaconda.org/menpo opencv3

Install Nvidia driver & CUDA

• Install driver

  sudo apt update
  ubuntu-drivers devices # check avaliable versions
  sudo apt install nvidia-driver-XXX
  sudo reboot
  nvidia-smi # check nvidia info
  

• Install toolkit
  • Download cuda toolkit (runfile) from web & install following prompts
  • When installing, ignore "Driver" because it has been installed
  • sudo vim ~/.bashrc
  • Add followings to the end

  export CUDA_HOME=/usr/local/cuda-11.4
  export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/cuda-11.4/lib64
  

  (
  cd deviceQuery
  sudo make 
  ./deviceQuerysudo make
  )
  

• Install cuDNN

  sudo cp cuda/include/cudnn.h /usr/local/cuda-11.4/include
  sudo cp cuda/lib64/libcudnn* /usr/local/cuda-11.4/lib64
  sudo chmod a+r /usr/local/cuda-11.4/include/cudnn.h 
  sudo chmod a+r /usr/local/cuda-11.4/lib64/libcudnn*
  cat /usr/local/cuda-11.4/include/cudnn.h | grep CUDNN_MAJOR -A 2
  

CUDA Framework

• CUDA (Compute Unified Device Architecture) is a parallel computing platform, =CUDA Driver + CUDA Toolkit.
• CUDA Toolkit = CUDA Libraries + CUDA Runtime
  • NVCC is CUDA compiler, belonging to CUDA Runtime
  • cuDNN is CUDA Deep Neural Network library, belonging to CUDA Libraries

Notes

• Most of Torch functionality directly work upon on CUDA Driver. That is why through Forward Compatible Upgrade, latest Torch version can partially work.
• For Custom C++ and CUDA Extensions (e.g., python setup.py build develop), Runtime is used. The Toolkit and Driver must be compatible.
• Cudatoolkit installed with conda/pip package is only partial Libraries (without Runtime), incomplete.
• Some commands:
  • nvidia-smi shows CUDA driver version
  • nvcc –-version shows CUDA runtime version (driver version >=runtime version)

Doceker

#pull Docker image from Docker Hub
docker pull nvidia/cuda:11.1.1-devel-ubuntu20.04 

#start a new Docker & display GPUs info
docker run --rm --gpus all nvidia/cuda:11.1.1-devel-ubuntu20.04 nvidia-smi 

#start a new Docker & mount local directory /home/local_dir into the container at the "/workspace" directory
docker run --name container_name --gpus all -v /home/local_dir:/workspace -it nvidia/cuda:11.1.1-devel-ubuntu20.04 /bin/bash

#star a previous stopped Docker container 
docker start container_name

#starts a Bash shell inside the running Docker container
docker exec -it container_name /bin/bash