Comments (2)
Hi,
Thank you very much for opening this issue! I made some progress today. It is working with a single end FASTQ file using the type MultiplexedSingleEndBarcodeInSequence
and I believe it would not be too much trouble to allow for other types, i.e., paired end and multiple samples inside a folder. However, I am currently running into an error is not complete type expression
with the TypeMap. I will try to debug more another day to solve this error.
Best regards,
Fabio
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Links to motivating forum posts here and here for reference.
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