brain-bzh/health_exg

Repository for the course "Analysis of medical signals" under the specialisation healthcare Engineering at IMT Atlantique

Repository for the ExG course under the "Healthcare Engineering" specialization at IMT Atlantique.

Contents: -Course slides -Lab Session -References

References

MEEG

EEG textbooks :

https://brainmaster.com/software/pubs/brain/Nunez%202ed.pdf

Picton et al. 2000 : http://cb3.unl.edu/dbrainlab/wp-content/uploads/sites/2/2013/12/0.-ERP-guidelines-Picton-et-al-2000.pdf

Standardization for EEG datasets : BIDS-EEG: https://pure.mpg.de/rest/items/item_3037703/component/file_3039868/content

EEG informed fMRI https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808233/

Best practices in data analysis and sharing in neuroimaging using MEEG https://osf.io/a8dhx

Electromagnetic brain mapping using MEG & EEG https://www.researchgate.net/profile/Sylvain_Baillet/publication/235638511_Electromagnetic_Brain_Mapping_using_MEG_EEG/links/0912f5122e4f65b081000000/Electromagnetic-Brain-Mapping-using-MEG-EEG.pdf

Preprocessing, artifact detection and removal

https://mne.tools/stable/auto_tutorials/preprocessing/plot_10_preprocessing_overview.html

https://mne.tools/stable/auto_tutorials/preprocessing/plot_40_artifact_correction_ica.html

https://mne.tools/stable/auto_tutorials/preprocessing/plot_55_setting_eeg_reference.html#sphx-glr-auto-tutorials-preprocessing-plot-55-setting-eeg-reference-py

ECG / EKG

Extremely detailed ressource on interpreting ECG in medical applications:

https://ecg.utah.edu/ or pdf version https://ecg.utah.edu/pdf/

Book chapter "Electrocardiography". David M. Mirvis and Ary L. Goldberger : http://www.doctor33.it/cont/download-center-files/17519/cap-electrocardiography-x20968allp1.pdf

Good video explaining the PQRST and the sinus rhythm https://www.youtube.com/watch?v=izX9woINRbM

From the same professor, a basic video about the cardiovascular system

https://www.youtube.com/watch?v=VWamhZ8vTL4

Deep learning for ECG https://arxiv.org/pdf/1707.01836.pdf (clinical)

Emotion prediction (videos) using ECG : https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=8543567

EMG

Techniques of EMG signal analysis: detection, processing, classification and applications- MBI Reaz, MS Hussain, F Mohd-Yasin - Biological procedures online, 2006

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1455479/

Surface electromyography signal processing and classification techniques RH Chowdhury, MBI Reaz, MABM Ali, AAA Bakar… - Sensors, 2013

https://www.mdpi.com/1424-8220/13/9/12431

Deep learning for EMG https://ieeexplore.ieee.org/abstract/document/8630679