Comments (3)
probably related to #270
from cyvcf2.
System info:
$ uname -r
4.18.0-425.19.2.el8_7.x86_64
$ gcc --version | head -1
gcc (GCC) 8.5.0 20210514 (Red Hat 8.5.0-16.0.2)
Easily reproducible with:
pip install cyvcf2==0.30.20
from cyvcf2.
thanks for reporting and apologies for the delay.
as far as I can see, this is fixed with more recent versions such as 0.30.22.
from cyvcf2.
Related Issues (20)
- Issues with using String in format field HOT 5
- Streaming VCFs using smart_open? HOT 3
- Writing to GT field HOT 2
- Remove support for Python 3.6 HOT 1
- Run tests on Python 3.11 in CI
- Conda packages are out of date HOT 5
- Linux packages for 0.30.20 are missing from pypi HOT 5
- Issues with cyvcf2 memory allocation HOT 3
- cyvcf2 wheel build fail on 0.30.19~0.30.22 (python3.11 + arm64 + debain bookworm) HOT 7
- variant.format('GT') yields unexpected string format HOT 3
- Bug: Set_samples function somehow removed all FORMAT fields HOT 2
- Floating point imprecision HOT 8
- Dealing with missing values in INFO column HOT 2
- Processing BED? HOT 2
- Any method available to split vcf files into individual sample vcf files
- Importing 64bit integers in FORMAT? HOT 4
- Add setter for POS HOT 1
- Crash with single GT allele value - UnicodeDecodeError: 'ascii' codec can't decode byte 0x81 in position 1: ordinal not in range(128) HOT 2
- Could you bump a new version to the pip HOT 1
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