Related Issues (20)
- variant.format('GT') yields unexpected string format HOT 3
- Bug: Set_samples function somehow removed all FORMAT fields HOT 2
- Floating point imprecision HOT 8
- Dealing with missing values in INFO column HOT 2
- Processing BED? HOT 2
- Importing 64bit integers in FORMAT? HOT 4
- Add setter for POS HOT 1
- Crash with single GT allele value - UnicodeDecodeError: 'ascii' codec can't decode byte 0x81 in position 1: ordinal not in range(128) HOT 2
- Could you bump a new version to the pip HOT 1
- Provide access to index stats HOT 6
- Suggest not to remove htslib/config.status at setup.py
- No macOS arm64 wheels available for 0.30.26 and 0.30.27 HOT 1
- Adding new variant record
- Multiallelic VCF with annotation in INFO field doesn't query all available infromation HOT 3
- ##INFO fields being dropped HOT 6
- Skip the warnings? HOT 2
- Missing values for multi-allelic variants result in large negative numbers in `.format("AD")`, not all the same HOT 1
- MacOS ARM wheels broken? HOT 12
- Error importing cyvcf2 with numpy 2.0.0 HOT 10
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