The checklistbank from catalogueoflife

Discuss how to best show synonyms

Synonyms need to expose their status and accordingTo in case of misapplied names. Status is missing from the Synonymy object currently.

And heterotypic synonyms might better not be labeled as such. Its a catch all. Only homotypic synonyms are clearly homotypic and should be shown as such.

Cancel create new sector button visibility inconsistent

Checkbox in table for multiple name selection to apply decisions

Search names by ID, name or issue

Error if no running imports

Cannot read property 'concat' of undefined

Drag n drop between nodes in the classification explorer

Add species estimate directly in the tree node

Col Source form - input from @yroskov

Please rearrange them as I present below:

Please add fields:

“Is new?” [values: 0=untouched, 1=new in a year cycle, 2=updated in a year cycle] (A flag for new and updated databases in a year cycle)
“Coverage” [values: Global, Regional] (Geographic coverage of the Source Database for the taxon)
“Completeness” [values: 1 to 100%] (Percentage of completeness of species list of the taxon provided by the Source Database)
“Checklist Confidence” [values: 1, 2, 3, 4, 5] (Quality of taxonomic checklist with values 1 to 5; quality is stated by the custodian in agreement with CoL editor. Confidence indicators are described at http://www.catalogueoflife.org/col/info/databases).
“Editor’s comments” [this field is new; it was not implemented in old structure. Perhaps later it should be extended into number of fields with management information].

Show issues on Taxon and Names

... coming in via the verbatim record currently

we have a top n side menu, tabs and a breadcrumb which often show very much the same. Can we reduce this without sacrifycing functionality? maybe we can reserve the sidebar for actions, stats or faved items?

Show verbatim record

verbatim record and its issues

Split view Management classification / GSD

Browse Management classification side by side with a chosen GSD, with opportunity to drag nodes from the GSD onto the management classification.

Allow manual upload of archives

to quickly test new archives. This should only be possible if the dataset is of origin UPLOADED.

Sector comparison view

Visualizing changes between different sector sync attempts should assist the editorial work a lot. The API is providing two ways of comparing different versions of a sector:

TextTree
A indented, simple text tree representation including synonyms for the entire sector is part of the SyncImport metrics we generate for every sync attempt. The API offers a diff service between any two successful attempts which can be rendered as a markdown table. We can easily change the representation or even allow to ask for different formats (e.g UnifiedDiff, Markdown, Html)

http://api-dev.col.plus/assembly/3/sync/210/treediff?attempts=7..9

NameIndeIds
Also the complete set of NameIndexIds for all names is included.
The API will offer a diff between any 2 attempts which could be visualised in a simple (potentially large) table.

http://api-dev.col.plus/assembly/3/sync/210/namesdiff?attempts=7..9

Show homotypic names and name relations on name page

We should not show "Homotypic Name Id", but instead list all homotypic names via the call:
/dataset/{dkey}/name/{id}/synonyms

Also show the publication and all name relations:
/dataset/{dkey}/name/{id}/relations
/dataset/{dkey}/name/{id}/publishedIn

Modify MC

Add child
Del child
Change name lookup via names index

Show dataset import metrics

Show import metrics for a dataset on a new tab.
Maybe as the home tab even instead of the metadata?

Draft preview button

Search in tree through names index

Manage imports

List currently running and queued imports.
Allow to cancel running or queued imports and schedule new ones

Upload dataset or source logo

A logo image for a dataset or ColSource should be hosted in the Clearinghouse.
This can be done either by pointing to an external image URL via the dataset metadata OR by manually uploading an image. Logo upload endpoint to be done:

CatalogueOfLife/backend#172
CatalogueOfLife/backend#152

Show verbatim data differently

Verbatim data is a different kind of representation and I think it would be better to show it more in a code style like json:

{
  "acef:AcceptedTaxonID" : "Fis-33634",
  "acef:AuthorString" : "Borodin, 1897",
  "acef:Sp2000NameStatus" : "synonym",
}

http://test.col.plus/dataset/1010/name/Fis-115182

organize issues by issue group

All issues are organized to either be general or specific for some kind of entity, e.g. names, taxa, references, etc.

It would be good to show issues on the dataset issue tab by these groups.
Needs to be exposed via http://api.col.plus/vocab/issue

See https://github.com/Sp2000/colplus-backend/blob/master/colplus-api/src/main/java/org/col/api/vocab/Issue.java#L401

Customise columns

Default settings based on issue types
User defined, save in localStorage, maybe persist to GBIF user later

Design simple landing page

There should be a Clearinghouse landing page when fist visiting the site.
Ideas to show:

short paragraph what the site is about
key numbers with links (num datasets, num names index names, num taxa/names in CoL draft)
latest dataset(s) added and imported

Filter datasets by catalogue

Allow dataset table to only show datasets for the scrutinized or provisional cat.

@yroskov Maybe rename the rendered value to "pCat" and "sCat" or "CoL" and "prov CoL"

create dataset issue tab

for more space in showing issues in a table

Direct link to data file in GitHub

Is not always present, but show when available

Add recent imports tab

would be nice to also know about the last successful imports

Allow manual update of all logos

apart from pulling a single logo during an import this triggers an update of all dataset logos from their configured URL can be manually triggered by calling: http://api.col.plus/admin/logo-update