ccoulombe Goto Github PK

furry-telegram.github.io

hpc-python

HPC Python lesson materials

incubator-mxnet

Lightweight, Portable, Flexible Distributed/Mobile Deep Learning with Dynamic, Mutation-aware Dataflow Dep Scheduler; for Python, R, Julia, Scala, Go, Javascript and more

links

Long Interval Nucleotide K-mer Scaffolder

longstitch

Correct and scaffold assemblies using long reads

magic_castle

Terraform modules to replicate a Compute Canada cluster in the cloud

magic_clusters

Magic Clusters recipes for various workshops

magic_infra

Magic Castle infrastructure for workshops

mandrake

Mandrake 🌿/👨‍🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding

mask2former

Code release for "Masked-attention Mask Transformer for Universal Image Segmentation"

medaka

Sequence correction provided by ONT Research

minkowskiengine

Minkowski Engine is an auto-diff neural network library for high-dimensional sparse tensors

mixer

Causal Mixture Model for GWAS summary statistics

nccl_examples

NCCL examples from NVIDIA examples

ntlink

Minimizer-based assembly scaffolding and mapping using long reads

numba

NumPy aware dynamic Python compiler using LLVM

numpy

The fundamental package for scientific computing with Python.

openslide-python

Python bindings to OpenSlide

pairtools

CLI tools to process mapped Hi-C data

phono3py

A simulation package of phonon-phonon interaction related properties

pip

The PyPA recommended tool for installing Python packages

pip-audit

Audits Python environments and dependency trees for known vulnerabilities

poppunk

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

pp-sketchlib

Library of sketching functions used by PopPUNK

practical-python

Practical Python Programming (course by @dabeaz)

puppet-jupyterhub

Puppet module to deploy a JupyterHub that submits job to Slurm

python-novice-inflammation

Programming with Python

pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

rcpp

Seamless R and C++ Integration

rmm

RAPIDS Memory Manager