chiaraherzog Goto Github PK

chiaraherzog.github.io

My website

datadrivencv

R package for building customizable CVs from spreadsheets

eutopsqc

functional_aging_sigs

Functional aging signatures code repository

heap-demo

illuminamousemethylationanno.12.v1.mm10

This package provides Illumina Mouse Methylation Array Annotation (12.v1, Genome Build mm10) compatible with minfi.

illuminamousemethylationmanifest

This package provides Illumina Mouse Methylation Array Manifest (12.v1, Genome Build mm10) compatible with minfi.

minfi

Devel repository for minfi

multiomics_intermittentfasting

This repository contains the relevant code to reproduce figures and analyses for the manuscript ``Longitudinal multi-omic analysis reveals profound clinical and molecular alterations upon intermittent fasting`` by Herzog, Vavourakis, Theeuwes et al.

multiomics_smokingcessation

This repository contains the relevant code to reproduce figures and analyses for the manuscript Longitudinal multi-omic evaluation of biomarkers of health and ageing over smoking cessation intervention by Herzog, Vavourakis, Theeuwes et al.

pmr.calculations

stard

Easily create STARD diagrams

wid-bc-source-data

Source data for the WID-BC-index manuscript, "The WID-BC-index identifies women with primary poor prognostic breast cancer based on DNA methylation in cervical samples" by James E. Barrett, Chiara Herzog, et al. (2021).

wid-cfoc_code

wid-qec-source-code

Analysis source code for the WID-qEC manuscript

wid.bc

Computation of the WID-BC-index from methylation data. Code is available for Research use only - no OSI licence.

wid.smk

WID.smk functions

wid_qtbc

WID™-qtBC repository

wid_smk_code

Code to reproduce analyses for WID-SMK paper by Herzog et al.

widclocks

Calculation of epigenetic WID clocks