chitrita Goto Github PK
Name: Chitrita Goswami
Type: User
Location: India
Name: Chitrita Goswami
Type: User
Location: India
R package for robust clustering of single cell RNA sequencing data
Implementation of Reinforcement Learning Algorithms. Python, OpenAI Gym, Tensorflow. Exercises and Solutions to accompany Sutton's Book and David Silver's course.
Python codes in Machine Learning, NLP, Deep Learning and Reinforcement Learning
The Ribosome Binding Site (RBS) Calculator can predict the translation initiation rate of a protein coding sequence in bacteria and design synthetic RBS sequences to rationally control the translation initiation rate. It is used to design synthetic biological systems.
The art of using t-SNE for single-cell transcriptomics
This repository contains a protocol to analyse RNA-seq data, focusing on alternative splicing & polyadenylation, authored by Oliver Ziff. The contents are based on multiple resources including the RNAseq worksheet; Biostars handbook; Data Camp; Coursera; and most importantly the experience of established experts in RNAseq analysis within my lab. The protocol uses a combination of bash unix commmand line and R scripts.
Models, design algorithms, and other software related to Salis lab publications
Single-cell RNA-seq Gene Expression Recovery
A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments
Scripts to recreate figures from the SC3 paper
Public collaboration of Scalable Single Cell Analytics
Allele-Specific Expression by Single-Cell RNA Sequencing
Single-Cell Analysis in Python. Scales to >1M cells.
R package to identify genes with differential distributions in single-cell RNA-seq
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Collections of library structure and sequence of popular single cell genomic methods
Accurate and robust imputation of scRNA-seq data
scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources of variation.
Normalization for single cell RNA-seq data
Single cell network synthesis toolkit
SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation
Trajectory inference for single-cell RNA-seq
Raw data with annotations
Table of software for the analysis of single-cell RNA-seq data.
Analysis of single cell RNA-seq data course
Collection of public scRNA-Seq datasets used by our group
Single Cell RNA-Seq analysis toolbox for Python
An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
Deep learning for single-cell transcript counts
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.