chupan1218/sycomore

sycomore

This package provides R implement of sycomore. It allows the quantification of the synergy and competition between two miRNAs when they target on the same mRNA, and allows large-scale and fast calculations.

This package will be sold to Bioconductor one day; but it's not there now so the easiest way to install it is through the devtools package: install.packages("devtools"); library(devtools); then, install sycomore via: install_github("chupan1218/sycomore"); library(sycomore);

The function based explanation documentation and application examples are available through the help. The other guide is the sycomore vignettes in which you also can get detailed information.