While running PolyChord with planck_2018_lowl.TT and with planck_2018_highl_plik.TT works, I get the following error as soon as I add planck_2018_lowl.EE to the likelihoods (full debug output further below):
(py36env) lh561@login-e-13:~/Documents/Projects/CobayaPrj$cobaya-run -f input/pc32_camb_p18_TTTEEElowTE_lcdm.yaml -d
2019-09-30 16:54:04,838 [output] Output to be read-from/written-into folder 'chains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm', with prefix 'pc32_camb_p18_TTTEEElowTE_lcdm'
2019-09-30 16:54:04,839 [output] Found existing products with the requested ouput prefix: 'chains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm/pc32_camb_p18_TTTEEElowTE_lcdm'
2019-09-30 16:54:04,840 [output] Deleting previous chain ('force' was requested).
2019-09-30 16:54:04,944 [input] Parameter 'A_planck' multiply defined.
2019-09-30 16:54:04,944 [input] Parameter 'A_planck' multiply defined.
2019-09-30 16:54:04,979 [run] Input info updated with defaults (dumped to YAML):
theory:
camb:
extra_args:
halofit_version: mead
bbn_predictor: PArthENoPE_880.2_standard.dat
lens_potential_accuracy: 1
num_massive_neutrinos: 1
nnu: 3.046
theta_H0_range:
- 20
- 100
path: null
renames:
omegabh2: ombh2
omegach2: omch2
omegal: omega_de
omegak: omk
yhe: YHe
yheused: YHe
YpBBN: Y_p
zrei: zre
speed: 0.3
stop_at_error: false
use_planck_names: false
likelihood:
planck_2018_lowl.TT:
clik_file: baseline/plc_3.0/low_l/commander/commander_dx12_v3_2_29.clik
params:
- A_planck
path: null
product_id: '151902'
renames:
- lowl
speed: 3000
planck_2018_lowl.EE:
clik_file: baseline/plc_3.0/low_l/simall/simall_100x143_offlike5_EE_Aplanck_B.clik
params:
- A_planck
path: null
product_id: '151902'
renames:
- lowE
speed: 4000
planck_2018_highl_plik.TTTEEE:
clik_file: baseline/plc_3.0/hi_l/plik/plik_rd12_HM_v22b_TTTEEE.clik
params:
- A_planck
- calib_100T
- calib_217T
- A_pol
- calib_100P
- calib_143P
- calib_217P
- cib_index
- A_cib_217
- xi_sz_cib
- A_sz
- ksz_norm
- gal545_A_100
- gal545_A_143
- gal545_A_143_217
- gal545_A_217
- A_sbpx_100_100_TT
- A_sbpx_143_143_TT
- A_sbpx_143_217_TT
- A_sbpx_217_217_TT
- ps_A_100_100
- ps_A_143_143
- ps_A_143_217
- ps_A_217_217
- galf_TE_index
- galf_TE_A_100
- galf_TE_A_100_143
- galf_TE_A_100_217
- galf_TE_A_143
- galf_TE_A_143_217
- galf_TE_A_217
- galf_EE_index
- galf_EE_A_100
- galf_EE_A_100_143
- galf_EE_A_100_217
- galf_EE_A_143
- galf_EE_A_143_217
- galf_EE_A_217
- A_cnoise_e2e_100_100_EE
- A_cnoise_e2e_143_143_EE
- A_cnoise_e2e_217_217_EE
- A_sbpx_100_100_EE
- A_sbpx_100_143_EE
- A_sbpx_100_217_EE
- A_sbpx_143_143_EE
- A_sbpx_143_217_EE
- A_sbpx_217_217_EE
path: null
product_id: '151902'
renames:
- plikHM_TTTEEE
speed: 7
sampler:
polychord:
base_dir: raw_polychord_output
blocking:
- - 1
- - ombh2
- omch2
- theta_MC_100
- tau
- logA
- ns
- - 10
- - A_planck
- - 20
- - A_cib_217
- xi_sz_cib
- A_sz
- ps_A_100_100
- ps_A_143_143
- ps_A_143_217
- ps_A_217_217
- ksz_norm
- gal545_A_100
- gal545_A_143
- gal545_A_143_217
- gal545_A_217
- calib_100T
- calib_217T
- galf_TE_A_100_143
- galf_TE_A_143_217
- galf_TE_A_100_217
- galf_TE_A_100
- galf_TE_A_143
- galf_TE_A_217
boost_posterior: 0
callback_function: null
cluster_posteriors: true
compression_factor: 0.36787944117144233
confidence_for_unbounded: 0.9999995
do_clustering: true
equals: true
feedback: null
file_root: null
logzero: -1.0e+300
max_ndead: .inf
nlive: 32
nprior: null
num_repeats: 2
path: global
posteriors: true
precision_criterion: 0.001
read_resume: true
seed: null
write_dead: true
write_live: true
write_resume: true
write_stats: true
prior:
SZ: 'lambda ksz_norm, A_sz: stats.norm.logpdf(ksz_norm+1.6*A_sz, loc=9.5, scale=3.0)'
params:
logA:
prior:
min: 2.5
max: 3.7
ref:
dist: norm
loc: 3.05
scale: 0.001
proposal: 0.001
latex: \log(10^{10} A_\mathrm{s})
drop: true
As:
value: 'lambda logA: 1e-10*np.exp(logA)'
latex: A_\mathrm{s}
derived: true
ns:
prior:
min: 0.885
max: 1.04
ref:
dist: norm
loc: 0.965
scale: 0.004
proposal: 0.002
latex: n_\mathrm{s}
theta_MC_100:
prior:
min: 1.03
max: 1.05
ref:
dist: norm
loc: 1.04
scale: 0.0004
proposal: 0.0002
latex: 100\theta_\mathrm{MC}
drop: true
renames: theta
cosmomc_theta:
value: 'lambda theta_MC_100: 1.e-2*theta_MC_100'
derived: false
H0:
latex: H_0
min: 20
max: 100
derived: true
ombh2:
prior:
min: 0.019
max: 0.025
ref:
dist: norm
loc: 0.0224
scale: 0.0001
proposal: 0.0001
latex: \Omega_\mathrm{b} h^2
renames:
- omegabh2
omch2:
prior:
min: 0.095
max: 0.145
ref:
dist: norm
loc: 0.12
scale: 0.001
proposal: 0.0005
latex: \Omega_\mathrm{c} h^2
renames:
- omegach2
omegam:
latex: \Omega_\mathrm{m}
derived: true
omegamh2:
derived: 'lambda omegam, H0: omegam*(H0/100)**2'
latex: \Omega_\mathrm{m} h^2
mnu:
value: 0.06
omega_de:
latex: \Omega_\Lambda
derived: true
renames:
- omegal
YHe:
latex: Y_\mathrm{P}
derived: true
renames:
- yheused
- yhe
Y_p:
latex: Y_P^\mathrm{BBN}
derived: true
renames:
- YpBBN
DHBBN:
derived: 'lambda DH: 10**5*DH'
latex: 10^5 \mathrm{D}/\mathrm{H}
tau:
prior:
min: 0.01
max: 0.4
ref:
dist: norm
loc: 0.055
scale: 0.006
proposal: 0.003
latex: \tau_\mathrm{reio}
zre:
latex: z_\mathrm{re}
derived: true
renames:
- zrei
sigma8:
latex: \sigma_8
derived: true
s8h5:
derived: 'lambda sigma8, H0: sigma8*(H0*1e-2)**(-0.5)'
latex: \sigma_8/h^{0.5}
s8omegamp5:
derived: 'lambda sigma8, omegam: sigma8*omegam**0.5'
latex: \sigma_8 \Omega_\mathrm{m}^{0.5}
s8omegamp25:
derived: 'lambda sigma8, omegam: sigma8*omegam**0.25'
latex: \sigma_8 \Omega_\mathrm{m}^{0.25}
A:
derived: 'lambda As: 1e9*As'
latex: 10^9 A_\mathrm{s}
clamp:
derived: 'lambda As, tau: 1e9*As*np.exp(-2*tau)'
latex: 10^9 A_\mathrm{s} e^{-2\tau}
age:
latex: '{\rm{Age}}/\mathrm{Gyr}'
derived: true
rdrag:
latex: r_\mathrm{drag}
derived: true
chi2__CMB:
derived: 'lambda chi2__planck_2018_lowl_TT, chi2__planck_2018_lowl_EE, chi2__planck_2018_highl_plik_TTTEEE:
sum([chi2__planck_2018_lowl_TT, chi2__planck_2018_lowl_EE, chi2__planck_2018_highl_plik_TTTEEE])'
latex: \chi^2_\mathrm{CMB}
A_planck:
prior:
dist: norm
loc: 1
scale: 0.0025
ref:
dist: norm
loc: 1
scale: 0.002
proposal: 0.0005
latex: y_\mathrm{cal}
renames: calPlanck
calib_100T:
prior:
dist: norm
loc: 1.0002
scale: 0.0007
ref:
dist: norm
loc: 1.0002
scale: 0.001
proposal: 0.0005
latex: c_{100}
renames: cal0
calib_217T:
prior:
dist: norm
loc: 0.99805
scale: 0.00065
ref:
dist: norm
loc: 0.99805
scale: 0.001
proposal: 0.0005
latex: c_{217}
renames: cal2
A_pol:
value: 1
calib_100P:
value: 1.021
calib_143P:
value: 0.966
calib_217P:
value: 1.04
cib_index:
value: -1.3
A_cib_217:
prior:
dist: uniform
min: 0
max: 200
ref:
dist: norm
loc: 67
scale: 10
proposal: 1.2
latex: A^\mathrm{CIB}_{217}
renames: acib217
xi_sz_cib:
prior:
dist: uniform
min: 0
max: 1
ref:
dist: halfnorm
loc: 0
scale: 0.1
proposal: 0.1
latex: \xi^{\mathrm{tSZ}\times\mathrm{CIB}}
renames: xi
A_sz:
prior:
dist: uniform
min: 0
max: 10
ref:
dist: norm
loc: 7
scale: 2
proposal: 0.6
latex: A^\mathrm{tSZ}_{143}
renames: asz143
ksz_norm:
prior:
dist: uniform
min: 0
max: 10
ref:
dist: halfnorm
loc: 0
scale: 3
proposal: 1
latex: A^\mathrm{kSZ}
renames: aksz
gal545_A_100:
prior:
dist: norm
loc: 8.6
scale: 2
ref:
dist: norm
loc: 7
scale: 2
proposal: 1
latex: A^\mathrm{dustTT}_{100}
renames: kgal100
gal545_A_143:
prior:
dist: norm
loc: 10.6
scale: 2
ref:
dist: norm
loc: 9
scale: 2
proposal: 1
latex: A^\mathrm{dustTT}_{143}
renames: kgal143
gal545_A_143_217:
prior:
dist: norm
loc: 23.5
scale: 8.5
ref:
dist: norm
loc: 21
scale: 4
proposal: 1.5
latex: A^\mathrm{dustTT}_{\mathrm{143}\times\mathrm{217}}
renames: kgal143217
gal545_A_217:
prior:
dist: norm
loc: 91.9
scale: 20
ref:
dist: norm
loc: 80
scale: 15
proposal: 2
latex: A^\mathrm{dustTT}_{217}
renames: kgal217
A_sbpx_100_100_TT:
value: 1
A_sbpx_143_143_TT:
value: 1
A_sbpx_143_217_TT:
value: 1
A_sbpx_217_217_TT:
value: 1
ps_A_100_100:
prior:
dist: uniform
min: 0
max: 400
ref:
dist: norm
loc: 257
scale: 24
proposal: 17
latex: A^\mathrm{PS}_{100}
renames: aps100
ps_A_143_143:
prior:
dist: uniform
min: 0
max: 400
ref:
dist: norm
loc: 47
scale: 10
proposal: 3
latex: A^\mathrm{PS}_{143}
renames: aps143
ps_A_143_217:
prior:
dist: uniform
min: 0
max: 400
ref:
dist: norm
loc: 40
scale: 12
proposal: 2
latex: A^\mathrm{PS}_{\mathrm{143}\times\mathrm{217}}
renames: aps143217
ps_A_217_217:
prior:
dist: uniform
min: 0
max: 400
ref:
dist: norm
loc: 104
scale: 13
proposal: 2.5
latex: A^\mathrm{PS}_{217}
renames: aps217
galf_TE_index:
value: -2.4
galf_TE_A_100:
prior:
dist: norm
loc: 0.13
scale: 0.042
ref:
dist: norm
loc: 0.13
scale: 0.1
proposal: 0.1
latex: A^\mathrm{dustTE}_{100}
renames: galfTE100
galf_TE_A_100_143:
prior:
dist: norm
loc: 0.13
scale: 0.036
ref:
dist: norm
loc: 0.13
scale: 0.1
proposal: 0.1
latex: A^\mathrm{dustTE}_{\mathrm{100}\times\mathrm{143}}
renames: galfTE100143
galf_TE_A_100_217:
prior:
dist: norm
loc: 0.46
scale: 0.09
ref:
dist: norm
loc: 0.46
scale: 0.1
proposal: 0.1
latex: A^\mathrm{dustTE}_{\mathrm{100}\times\mathrm{217}}
renames: galfTE100217
galf_TE_A_143:
prior:
dist: norm
loc: 0.207
scale: 0.072
ref:
dist: norm
loc: 0.207
scale: 0.1
proposal: 0.1
latex: A^\mathrm{dustTE}_{143}
renames: galfTE143
galf_TE_A_143_217:
prior:
dist: norm
loc: 0.69
scale: 0.09
ref:
dist: norm
loc: 0.69
scale: 0.1
proposal: 0.1
latex: A^\mathrm{dustTE}_{\mathrm{143}\times\mathrm{217}}
renames: galfTE143217
galf_TE_A_217:
prior:
dist: norm
loc: 1.938
scale: 0.54
ref:
dist: norm
loc: 1.938
scale: 0.2
proposal: 0.2
latex: A^\mathrm{dustTE}_{217}
renames: galfTE217
galf_EE_index:
value: -2.4
galf_EE_A_100:
value: 0.055
latex: A^\mathrm{dustEE}_{100}
renames: galfEE100
galf_EE_A_100_143:
value: 0.04
latex: A^\mathrm{dustEE}_{\mathrm{100}\times\mathrm{143}}
renames: galfEE100143
galf_EE_A_100_217:
value: 0.094
latex: A^\mathrm{dustEE}_{\mathrm{100}\times\mathrm{217}}
renames: galfEE100217
galf_EE_A_143:
value: 0.086
latex: A^\mathrm{dustEE}_{143}
renames: galfEE143
galf_EE_A_143_217:
value: 0.21
latex: A^\mathrm{dustEE}_{\mathrm{143}\times\mathrm{217}}
renames: galfEE143217
galf_EE_A_217:
value: 0.7
latex: A^\mathrm{dustEE}_{217}
renames: galfEE217
A_cnoise_e2e_100_100_EE:
value: 1
A_cnoise_e2e_143_143_EE:
value: 1
A_cnoise_e2e_217_217_EE:
value: 1
A_sbpx_100_100_EE:
value: 1
A_sbpx_100_143_EE:
value: 1
A_sbpx_100_217_EE:
value: 1
A_sbpx_143_143_EE:
value: 1
A_sbpx_143_217_EE:
value: 1
A_sbpx_217_217_EE:
value: 1
output: pc32_camb_p18_TTTEEElowTE_lcdm
modules: /rds/user/lh561/hpc-work/data/CobayaData/modules
debug: true
resume: false
force: true
2019-09-30 16:54:05,072 [prior] Loading external prior 'SZ' from: 'lambda ksz_norm, A_sz: stats.norm.logpdf(ksz_norm+1.6*A_sz, loc=9.5, scale=3.0)'
2019-09-30 16:54:05,072 [prior] *WARNING* External prior 'SZ' loaded. Mind that it might not be normalized!
2019-09-30 16:54:05,073 [likelihood] Parameters were assigned as follows:
2019-09-30 16:54:05,073 [likelihood] - 'planck_2018_lowl.TT':
2019-09-30 16:54:05,073 [likelihood] Input: ['A_planck']
2019-09-30 16:54:05,073 [likelihood] Output: []
2019-09-30 16:54:05,073 [likelihood] - 'planck_2018_lowl.EE':
2019-09-30 16:54:05,073 [likelihood] Input: ['A_planck']
2019-09-30 16:54:05,073 [likelihood] Output: []
2019-09-30 16:54:05,073 [likelihood] - 'planck_2018_highl_plik.TTTEEE':
2019-09-30 16:54:05,073 [likelihood] Input: ['A_planck', 'calib_100T', 'calib_217T', 'A_pol', 'calib_100P', 'calib_143P', 'calib_217P', 'cib_index', 'A_cib_217', 'xi_sz_cib', 'A_sz', 'ksz_norm', 'gal545_A_100', 'gal545_A_143', 'gal545_A_143_217', 'gal545_A_217', 'A_sbpx_100_100_TT', 'A_sbpx_143_143_TT', 'A_sbpx_143_217_TT', 'A_sbpx_217_217_TT', 'ps_A_100_100', 'ps_A_143_143', 'ps_A_143_217', 'ps_A_217_217', 'galf_TE_index', 'galf_TE_A_100', 'galf_TE_A_100_143', 'galf_TE_A_100_217', 'galf_TE_A_143', 'galf_TE_A_143_217', 'galf_TE_A_217', 'galf_EE_index', 'galf_EE_A_100', 'galf_EE_A_100_143', 'galf_EE_A_100_217', 'galf_EE_A_143', 'galf_EE_A_143_217', 'galf_EE_A_217', 'A_cnoise_e2e_100_100_EE', 'A_cnoise_e2e_143_143_EE', 'A_cnoise_e2e_217_217_EE', 'A_sbpx_100_100_EE', 'A_sbpx_100_143_EE', 'A_sbpx_100_217_EE', 'A_sbpx_143_143_EE', 'A_sbpx_143_217_EE', 'A_sbpx_217_217_EE']
2019-09-30 16:54:05,073 [likelihood] Output: []
2019-09-30 16:54:05,073 [likelihood] - 'theory':
2019-09-30 16:54:05,073 [likelihood] Input: ['As', 'ns', 'cosmomc_theta', 'ombh2', 'omch2', 'mnu', 'tau']
2019-09-30 16:54:05,073 [likelihood] Output: ['H0', 'omegam', 'omega_de', 'YHe', 'Y_p', 'zre', 'sigma8', 'age', 'rdrag', 'DH']
2019-09-30 16:54:05,074 [camb] *local* CAMB not found at /rds/user/lh561/hpc-work/data/CobayaData/modules/code/CAMB
2019-09-30 16:54:05,074 [camb] Importing *global* CAMB.
2019-09-30 16:54:05,129 [planck_2018_lowl.TT] Importing clik from /rds/user/lh561/hpc-work/data/CobayaData/modules/code/planck
----
clik version 3be036bbb4f9
gibbs_gauss b13c8fda-1837-41b5-ae2d-78d6b723fcf1
Checking likelihood '/rds/user/lh561/hpc-work/data/CobayaData/modules/data/planck_2018/baseline/plc_3.0/low_l/commander/commander_dx12_v3_2_29.clik' on test data. got -11.6257 expected -11.6257 (diff -1.07424e-09)
----
Initializing SimAll
----
clik version 3be036bbb4f9
simall simall_EE_BB_TE
Checking likelihood '/rds/user/lh561/hpc-work/data/CobayaData/modules/data/planck_2018/baseline/plc_3.0/low_l/simall/simall_100x143_offlike5_EE_Aplanck_B.clik' on test data. got -197.99 expected -197.99 (diff -4.1778e-08)
----
----
clik version 3be036bbb4f9
smica
Checking likelihood '/rds/user/lh561/hpc-work/data/CobayaData/modules/data/planck_2018/baseline/plc_3.0/hi_l/plik/plik_rd12_HM_v22b_TTTEEE.clik' on test data. got -1172.47 expected -1172.47 (diff -4.34054e-07)
----
2019-09-30 16:54:05,560 [likelihood] The theory code will compute the following products, requested by the likelihoods: ['H0', 'omegam', 'omega_de', 'YHe', 'Y_p', 'zre', 'sigma8', 'age', 'rdrag', 'DH', 'Cl']
2019-09-30 16:54:05,606 [polychord] Initializing
2019-09-30 16:54:05,606 [polychord] Importing *global* PolyChord.
2019-09-30 16:54:05,613 [polychord] Storing raw PolyChord output in 'chains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm/raw_polychord_output'.
2019-09-30 16:54:05,614 [prior] *WARNING* There are unbounded parameters. Prior bounds are given at 0.9999995 confidence level. Beware of likelihood modes at the edge of the prior
2019-09-30 16:54:05,621 [polychord] Calling PolyChord with arguments:
2019-09-30 16:54:05,621 [polychord] base_dir: chains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm/raw_polychord_output
2019-09-30 16:54:05,621 [polychord] boost_posterior: 0
2019-09-30 16:54:05,621 [polychord] cluster_dir: chains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm/raw_polychord_output/clusters
2019-09-30 16:54:05,621 [polychord] cluster_posteriors: True
2019-09-30 16:54:05,621 [polychord] compression_factor: 0.36787944117144233
2019-09-30 16:54:05,621 [polychord] do_clustering: True
2019-09-30 16:54:05,621 [polychord] equals: True
2019-09-30 16:54:05,621 [polychord] feedback: 2
2019-09-30 16:54:05,622 [polychord] file_root: pc32_camb_p18_TTTEEElowTE_lcdm
2019-09-30 16:54:05,622 [polychord] grade_dims: [6, 1, 20]
2019-09-30 16:54:05,622 [polychord] grade_frac: [12, 20, 800]
2019-09-30 16:54:05,622 [polychord] logzero: -1e+300
2019-09-30 16:54:05,622 [polychord] max_ndead: -1
2019-09-30 16:54:05,622 [polychord] maximise: False
2019-09-30 16:54:05,622 [polychord] nfail: -1
2019-09-30 16:54:05,622 [polychord] nlive: 32
2019-09-30 16:54:05,622 [polychord] nlives: {}
2019-09-30 16:54:05,622 [polychord] nprior: -1
2019-09-30 16:54:05,622 [polychord] num_repeats: 2
2019-09-30 16:54:05,622 [polychord] posteriors: True
2019-09-30 16:54:05,622 [polychord] precision_criterion: 0.001
2019-09-30 16:54:05,622 [polychord] read_resume: False
2019-09-30 16:54:05,622 [polychord] seed: -1
2019-09-30 16:54:05,622 [polychord] write_dead: True
2019-09-30 16:54:05,622 [polychord] write_live: True
2019-09-30 16:54:05,622 [polychord] write_paramnames: False
2019-09-30 16:54:05,622 [polychord] write_prior: True
2019-09-30 16:54:05,622 [polychord] write_resume: True
2019-09-30 16:54:05,622 [polychord] write_stats: True
2019-09-30 16:54:05,622 [polychord] Sampling!
PolyChord: MPI is already initilised, not initialising, and will not finalize
PolyChord: Next Generation Nested Sampling
copyright: Will Handley, Mike Hobson & Anthony Lasenby
version: 1.16
release: 1st March 2019
email: [email protected]
Run Settings
nlive : 32
nDims : 27
nDerived : 23
Doing Clustering
Generating equally weighted posteriors
Generating weighted posteriors
Clustering on posteriors
Writing a resume file tochains/planck_2018/lcdm/pc32_camb_p18_TTTEEElowTE_lcdm/raw_polychord_output/pc32_camb_p18_TTTEEElowTE_lcdm.resume
generating live points
2019-09-30 16:54:05,626 [model] Posterior to be computed for parameters {'logA': 3.5037013816249623, 'ns': 0.9112045733967743, 'theta_MC_100': 1.041265037924763, 'ombh2': 0.021621996540981202, 'omch2': 0.14176980838432607, 'tau': 0.3095362460289987, 'A_planck': 1.0059452468116512, 'calib_100T': 0.9987164276517926, 'calib_217T': 0.9969867491925797, 'A_cib_217': 161.1045890924937, 'xi_sz_cib': 0.2051553164786664, 'A_sz': 5.386228462601731, 'ksz_norm': 6.765631397757046, 'gal545_A_100': 13.871489482728224, 'gal545_A_143': 10.6969527157267, 'gal545_A_143_217': 20.8161734334329, 'gal545_A_217': 178.5397415906308, 'ps_A_100_100': 130.0920806163113, 'ps_A_143_143': 89.60662764337052, 'ps_A_143_217': 164.5425707037178, 'ps_A_217_217': 84.67800468096046, 'galf_TE_A_100': 0.0490355091419101, 'galf_TE_A_100_143': 0.037890502727434563, 'galf_TE_A_100_217': 0.7121590683248342, 'galf_TE_A_143': 0.328393151407387, 'galf_TE_A_143_217': 1.0608083053493131, 'galf_TE_A_217': 4.576910928933754}
2019-09-30 16:54:05,626 [prior] Evaluating prior at array([3.50370138e+00, 9.11204573e-01, 1.04126504e+00, 2.16219965e-02,
1.41769808e-01, 3.09536246e-01, 1.00594525e+00, 9.98716428e-01,
9.96986749e-01, 1.61104589e+02, 2.05155316e-01, 5.38622846e+00,
6.76563140e+00, 1.38714895e+01, 1.06969527e+01, 2.08161734e+01,
1.78539742e+02, 1.30092081e+02, 8.96066276e+01, 1.64542571e+02,
8.46780047e+01, 4.90355091e-02, 3.78905027e-02, 7.12159068e-01,
3.28393151e-01, 1.06080831e+00, 4.57691093e+00])
2019-09-30 16:54:05,628 [prior] Got logpriors = [-52.7633457971763, -3.9407015400894174]
2019-09-30 16:54:05,628 [likelihood] Got input parameters: OrderedDict([('As', 3.323825200880004e-09), ('ns', 0.9112045733967743), ('cosmomc_theta', 0.01041265037924763), ('ombh2', 0.021621996540981202), ('omch2', 0.14176980838432607), ('mnu', 0.06), ('tau', 0.3095362460289987), ('A_planck', 1.0059452468116512), ('calib_100T', 0.9987164276517926), ('calib_217T', 0.9969867491925797), ('A_pol', 1), ('calib_100P', 1.021), ('calib_143P', 0.966), ('calib_217P', 1.04), ('cib_index', -1.3), ('A_cib_217', 161.1045890924937), ('xi_sz_cib', 0.2051553164786664), ('A_sz', 5.386228462601731), ('ksz_norm', 6.765631397757046), ('gal545_A_100', 13.871489482728224), ('gal545_A_143', 10.6969527157267), ('gal545_A_143_217', 20.8161734334329), ('gal545_A_217', 178.5397415906308), ('A_sbpx_100_100_TT', 1), ('A_sbpx_143_143_TT', 1), ('A_sbpx_143_217_TT', 1), ('A_sbpx_217_217_TT', 1), ('ps_A_100_100', 130.0920806163113), ('ps_A_143_143', 89.60662764337052), ('ps_A_143_217', 164.5425707037178), ('ps_A_217_217', 84.67800468096046), ('galf_TE_index', -2.4), ('galf_TE_A_100', 0.0490355091419101), ('galf_TE_A_100_143', 0.037890502727434563), ('galf_TE_A_100_217', 0.7121590683248342), ('galf_TE_A_143', 0.328393151407387), ('galf_TE_A_143_217', 1.0608083053493131), ('galf_TE_A_217', 4.576910928933754), ('galf_EE_index', -2.4), ('galf_EE_A_100', 0.055), ('galf_EE_A_100_143', 0.04), ('galf_EE_A_100_217', 0.094), ('galf_EE_A_143', 0.086), ('galf_EE_A_143_217', 0.21), ('galf_EE_A_217', 0.7), ('A_cnoise_e2e_100_100_EE', 1), ('A_cnoise_e2e_143_143_EE', 1), ('A_cnoise_e2e_217_217_EE', 1), ('A_sbpx_100_100_EE', 1), ('A_sbpx_100_143_EE', 1), ('A_sbpx_100_217_EE', 1), ('A_sbpx_143_143_EE', 1), ('A_sbpx_143_217_EE', 1), ('A_sbpx_217_217_EE', 1)])
2019-09-30 16:54:05,629 [camb] Computing (state 0)
2019-09-30 16:54:05,629 [camb] Setting parameters: {'As': 3.323825200880004e-09, 'ns': 0.9112045733967743, 'cosmomc_theta': 0.01041265037924763, 'ombh2': 0.021621996540981202, 'omch2': 0.14176980838432607, 'mnu': 0.06, 'tau': 0.3095362460289987, 'halofit_version': 'mead', 'bbn_predictor': 'PArthENoPE_880.2_standard.dat', 'lens_potential_accuracy': 1, 'num_massive_neutrinos': 1, 'nnu': 3.046, 'theta_H0_range': [20, 100], 'H0': None, 'lmax': 2508}
2019-09-30 16:54:05,645 [camb] Setting attributes of CAMBParams: {'WantTransfer': True, 'Want_CMB': True, 'NonLinear': 'NonLinear_lens'}
2019-09-30 16:54:06,064 [planck_2018_lowl.TT] Got parameters {'A_planck': 1.0059452468116512}
2019-09-30 16:54:06,064 [planck_2018_lowl.TT] Evaluated to logp=-47.1838 with derived {}
2019-09-30 16:54:06,064 [planck_2018_lowl.EE] Got parameters {'A_planck': 1.0059452468116512}
2019-09-30 16:54:06,071 [exception handler] ---------------------------------------
Traceback (most recent call last):
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/likelihood.py", line 129, in _logp_cached
i_state = next(i for i in range(self.n_states)
StopIteration
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/home/lh561/.virtualenvs/py36env/bin/cobaya-run", line 11, in <module>
load_entry_point('cobaya', 'console_scripts', 'cobaya-run')()
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/run.py", line 154, in run_script
run(info)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/run.py", line 87, in run
sampler.run()
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/sampler.py", line 182, in __exit__
self.close(exception_type, exception_value, traceback)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/run.py", line 87, in run
sampler.run()
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/samplers/polychord/polychord.py", line 233, in run
self.pc_prior, self.dumper)
File "/home/lh561/.virtualenvs/py36env/lib/python3.6/site-packages/pypolychord-1.16-py3.6-linux-x86_64.egg/pypolychord/__init__.py", line 231, in run_polychord
settings.seed)
File "/home/lh561/.virtualenvs/py36env/lib/python3.6/site-packages/pypolychord-1.16-py3.6-linux-x86_64.egg/pypolychord/__init__.py", line 192, in wrap_loglikelihood
logL, phi[:] = loglikelihood(theta)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/samplers/polychord/polychord.py", line 218, in logpost
self.model.logposterior(params_values))
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/model.py", line 280, in logposterior
make_finite=make_finite, cached=cached, _no_check=True)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/model.py", line 186, in loglikes
_derived=_derived, cached=cached)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/likelihood.py", line 360, in logps
_derived=this_derived_dict, cached=cached, **this_params_dict)]
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/likelihood.py", line 146, in _logp_cached
self.states[i_state]["logp"] = self.logp(_derived=_derived, **params_values)
File "/home/lh561/Documents/Projects/CobayaPrj/cobaya/cobaya/likelihoods/_base_classes/_planck_clik_prototype.py", line 139, in logp
loglike = self.clik(self.vector)[0]
File "lkl.pyx", line 89, in clik.lkl.clik.__call__
clik.lkl.CError: <unprintable CError object>
-------------------------------------------------------------
2019-09-30 16:54:06,071 [exception handler] Some unexpected ERROR occurred. You can see the exception information above.
We recommend trying to reproduce this error with 'debug:True' in the input.
If you cannot solve it yourself and need to report it, include the debug output,
which you can send it to a file setting 'debug_file:[some_file_name]'.