Comments (3)
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Tks for the reply @EduEyras !
You still got results, which means that it is not a format issue or a
problem with the transcript IDs, I guess.
Could you confirm that the current tutorial support files (Ensemble fasta and gtf) and the command lines are the same used to generate those outputs ?
We do not encounter the error with the diffSplice analysis. Could this be a python version issue ?
Maybe, i will check this out and come back with the answer
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Related Issues (20)
- error with diffSplice HOT 10
- diffSplice --lower-bound doesn't work ! HOT 4
- ERROR:psiCalculator:No expression values have been buffered. HOT 3
- DiffSplice significant results have dpsi values of 0 HOT 5
- Encountering errors when trying to process large numbers of samples with SUPPA2 DiffSplice HOT 1
- Definition of Positive and Negative is inconsistent with Fig 3 for 'Right' Alternative Terminal Exon Events
- A problem occur in step 'psiPerEvent' HOT 13
- Wondering will SUPPA generate different results while using the same file? HOT 1
- ERROR:lib.tools:['Unexpected number of fields. 3 expected, 2 given'] HOT 3
- Why this regions were not regarded as RI ? HOT 2
- Something went wrong with detection of A5 and A3 HOT 6
- Regarding pvalues in diffSplice HOT 1
- generateEvents missies some Retained Intron (RI) events HOT 5
- PSI normalization HOT 4
- getting nothing in results simple identification of AS events HOT 5
- Can diffsplice deal with condition only has one sample(no replications) HOT 2
- SUPPA not working on quantification HOT 10
- psiPerIsoform resulting in empty .psi file HOT 2
- psiperEvent not working HOT 6
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