getting nothing in results simple identification of AS events

[Xtreme011]

getting nothing in results simple identification of AS events

[EduEyras]

Could you share a sample of the GTF file you use as input and your command line?
This problem is usually an issue with the format of the GTF or an incomplete command line.
Thanks
E.

[Xtreme011]

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[EduEyras]

Please copy-paste few lines of data and the command line into the github window. I don't have a way to activate the html viewing
Thanks
E/

[Xtreme011]

hey there, I figured that out somehow as I am still not sure about. I will update whenever I will know how I did it. Btw can you please tell me how can I get transcript expression file for my samples.
Thanks in advance.

[EduEyras]

Please look at our papers https://pubmed.ncbi.nlm.nih.gov/26179515/ https://pubmed.ncbi.nlm.nih.gov/29571299/ They contain information on how to obtain the expression files. In our wiki tutorial there is more info: https://github.com/comprna/SUPPA/wiki/SUPPA2-tutorial I hope this helps E.

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