Giter Site home page Giter Site logo

genefuserust's People

Contributors

crispy13 avatar

Stargazers

 avatar

Watchers

 avatar

genefuserust's Issues

EmptyFileError when reading fasta

(base) lvzenglei@computer-6:/nfs/disk7/user/lvzenglei/self_code/genefuse/newGeneFuseRust/GeneFuseRust-0.1.3$ /nfs/disk7/user/lvzenglei/self_code/genefuse/newGeneFuseRust/GeneFuseRust-0.1.3/target/release/genefuserust -t 20 -r /nfs/disk4/user/lishiqi/database/bed/ucsc.hg19.fasta -f /nfs/disk2/user/cuifenglei/Mybox/HTMLreport/Merge/genefuse/genefuse.hg19.csv -1 /nfs/disk7/519_sample/novo_sample/20240408/WKGS519G-240405-01/GS519G-240403-01F-f_S125_L001_R1_001.fastq.gz -2 /nfs/disk7/519_sample/novo_sample/20240408/WKGS519G-240405-01/GS519G-240403-01F-f_S125_L001_R2_001.fastq.gz -h /nfs/disk7/user/lvzenglei/self_code/genefuse/result/genefuse_rust/GS519G-240403-01_tumor_computer-6.log 

# /nfs/disk7/user/lvzenglei/self_code/genefuse/newGeneFuseRust/GeneFuseRust-0.1.3/target/release/genefuserust -t 20 -r /nfs/disk4/user/lishiqi/database/bed/ucsc.hg19.fasta -f /nfs/disk2/user/cuifenglei/Mybox/HTMLreport/Merge/genefuse/genefuse.hg19.csv -1 /nfs/disk7/519_sample/novo_sample/20240408/WKGS519G-240405-01/GS519G-240403-01F-f_S125_L001_R1_001.fastq.gz -2 /nfs/disk7/519_sample/novo_sample/20240408/WKGS519G-240405-01/GS519G-240403-01F-f_S125_L001_R2_001.fastq.gz -h /nfs/disk7/user/lvzenglei/self_code/genefuse/result/genefuse_rust/GS519G-240403-01_tumor_computer-6.log

thread 'main' panicked at src/genefuse.rs:37:15:
called `Result::unwrap()` on an `Err` value: EmptyFileError { cxt: "\"/nfs/disk4/user/lishiqi/database/bed/ucsc.hg19.fasta\"", loc: "src/core/fasta_reader.rs:82:17" }
note: run with `RUST_BACKTRACE=1` environment variable to display a backtrace
(base) lvzenglei@computer-6:/nfs/disk7/user/lvzenglei/self_code/genefuse/newGeneFuseRust/GeneFuseRust-0.1.3$ ls -lha /nfs/disk4/user/lishiqi/database/bed/ucsc.hg19.fasta
-rw-rwxr-- 1 2004 2004 3.0G Sep 25  2018 /nfs/disk4/user/lishiqi/database/bed/ucsc.hg19.fasta

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.