Currently, I work at the Netherlands eScience Center, where I collaborate with scientists from universities and research institutes in the Netherlands, coding for open-source scientific projects in the life sciences and healthcare.
I am a research software engineer with a background in bioinformatics and computational biology. My passion lies in software engineering and machine learning, and I love applying them to solve scientific challenges.
- Vantage6, a privacy preserving federated learning infrastructure for secure insight exchange.
- NPLinker, a python framework for integrating multi-omics data to discover new microbial natural products.
- STRAP, a microservice and tools to transform proprietary healthcare data into the standard FHIR format to facilitate self tracking for prevention and diagnosis of heart disease.
- DeepRank, a deep learning framework for data mining 3D protein-protein interfaces.
- MatchMS, a python library for processing and similarity evaluation of mass spectrometry data.
- ๐ Python
- ๐ TypeScript
- ๐ Shell script
- ๐ฅ๏ธ MacOS
- ๐ iTerm2
- ๐ ZSH + Oh My Zsh
- ๐ฆ VS Code