data2health/mtip-tutorial

Managing Translational Informatics Projects Tutorial

Managing Translational Informatics Projects

This tutorial aims to teach informatics program and project managers about tools and techniques for collaborative and distributed project management for informatics projects.

See the site at: Managing Translational Informatics Projects

mtip-tutorial's Issues

broken links to temp repo

Extract smaller Google Sheet from larger Google Sheet

• Learn more about how to create an extract, keeping both versions

TMD Issue

Test Issue

clarify what is meant by the word 'tag'

Test

• Create a ticket

• Answer the ticket

• Close the issue

Class issue

• Cannot assign
• Audio keeps cutting off
• Have to log/off and back on

would like to get a better sense of how all of the tools live in this ecosystem, roles per tool etc

Fix link on delete info

https://data2health.github.io/mtip-tutorial/lessons/Lesson3.html

How to keep cats off the keyboard

each lesson needs tasks assigned

add bits about issue and PR templates

https://help.github.com/en/articles/about-issue-and-pull-request-templates

Melissa loves github

• testing
• testing

clinical data

• - extract data from EMR
• - pre-process raw data

Tom Issue Two

add resource on keyboard shortcuts

eg. control and arrows, control shift arrows

Lesson 1 Task: Think about security considerations

Security should be considered at beginning of study, otherwise it can cause delays in research project.

HIPAA and patient privacy

• Do any of your projects involve PHI?

• PHI needs to be encrypted in transit and ideally at rest.

• Do your projects involve building or using systems that require sign-in? If your project requires participation by multiple institutions, is this accounted for by these systems?

• What are the plans for keeping up-to-date on security patches and updates for tech stack.

• How will patient consent be collected; does the consent form take into account where your data will live, and what data is collected. How are you collecting and tracking data about which patients signed which versions of the consent? If there are options within the consent, where are these digitally tracked?

IRB: Technology solution must be inline with Study protocol and IRB documentation.
Good news! These can be updated for a study.
Security Review: Systems generally have to have a security review.
Internally developed research systems as well as contracted solutions and third party services.
If not done at beginning of study, can cause delays in research project.

flesh out guidance on filing in multiple folders

from here

Include guidance about how to write a good issue

Tom Issue One

• Add cat photo to issue
• Smile contentedly

Liz test

Not sure why you got a blank message from me! Sorry Julie.

test issue

Non-Issue Issue

• to-do

• list

Lesson 4 - quoting in slack?

If quoting saves time in slack, add short activity around this. I missed this today and which I had some notes to go back to.

ada

Test Issue

• Test
• Tested

Lesson 1 Task: Create a user story

Using the following structure, write a user story pertinent to one of your (real) projects:

As a role or user,

• I want describe what the user wants
• So that describe why the user wants it

Acceptance Criteria:

• List of things that help define done

Example story:

As a user, when viewing features on the evaluation form I want to only see references when desired,
So that only the important information is presented to me first, but I can discover more information when needed.
 
Acceptance criteria:
Users can expand to view reference details when provided for a given feature. 

test issue

• test action item
• test action item 2

Deep and meaningful input