Name: Developmental Cognition and Neuroimaging Labs
Type: Organization
Bio: Our lab uses MRI to examine typical and atypical brain development. Our research is examining children with ASD as well as children and adults with ADHD.
Location: United States of America
Blog: https://innovation.umn.edu/developmental-cognition-and-neuroimaging-lab/
Developmental Cognition and Neuroimaging Labs's Projects
Pipeline to complete within-run and between-runs analyses of task-based fMRI dense timeseries data. This tool works with data that were minimally processed using the DCAN Labs' ABCD-HCP-Pipeline, including their Collection 3165 release through NDA.
For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.
A citizen science game for ABCD Study Quality Control of functional image registration.
bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
A citizen science game for ABCD Study Quality Control of surface delineations.
A citizen science game for ABCD Study Quality Control of anatomical image registration.
ABCD Study TGZ DICOM data to BIDS input setup scripts.
This project houses the code repository for examining the factors that drive framewise displacement in the ABCD study
Used to download DICOM images from the NIMH data archive for ABCD data processing.
repository which reads in eprime task files from SST, MID, and nBack tasks.
Automated split-half subset reliability analysis scripts written for the ABCD resource paper.
This BIDS App provides the utility of creating a nnU-Net anatomical MRI segmentation and mask with a infant brain trained model. It can easily be included in other processing pipelines and for circumventing JLF within Nibabies.
Brain Imaging Connectivity Extraction Program Solution
Brain Imaging Connectivity Extraction Program Solution
An example that illustrates how to wrap a BIDS project with DataLad and then process the images.
A graphical tool that indexes a folder of dicoms and provides the user with an interface to convert those dicoms into BIDS.
This repository contains all code for the BLMM toolbox.
some default
some default
Computes the maximum Hausdorff distance between pairs of ROIs in a given collection of 3D ROIs.