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Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

Home Page: https://bioconductor.org/packages/Rsamtools

License: Other

Shell 0.19% C++ 13.01% C 33.91% R 52.90%

rsamtools-csi's Introduction

Rsamtools is an R/Bioconductor package that provides an interface to the samtools, bcftools, and tabix utilities for manipulating SAM (Sequence Alignment / Map), FASTA, binary variant call (BCF) and compressed indexed tab-delimited (tabix) files.

See https://bioconductor.org/packages/Rsamtools for more information including how to install the release version of the package (please refrain from installing directly from GitHub).

rsamtools-csi's People

Contributors

mtmorgan avatar nhayden avatar hpages avatar dtenenba avatar nturaga avatar sonali-bioc avatar jwokaty avatar lshep avatar diego-rt avatar dvantwisk avatar vobencha avatar bellatrick avatar kriemo avatar shians avatar

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