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Name: Samuel Joseph Haynes
Type: User
Bio: Applications consultant at the Edinburgh International Data Facility (EIDF). Recently completed my Bioinformatics PhD studying yeast transcriptomics.
Samuel Joseph Haynes's Projects
introduction_phd_chapter
materials_and_methods_phd_chapter
mlpr-tutoring
Supplementary material for the Machine Learning and Pattern Recognition masters course at the University of Edinburgh. The majority of the topics here are inspired by conversations during my teaching support role at ML-base.
nextflow_paired_reads_pipeline
phdbayesianwork
Having completed a semester of my PhD, I now intend to restructure and backup all of my codes and thoughts. I intend to improve my overall coding practice
phruta
The phruta R package
rnafracquant
RNA quantification from cellular fractions
shell-novice
The Unix Shell
shs_sdf_training
Basic introduction to running tasks on the Safe Haven SuperDome Flex.
ssd1_cracanalysis_2020
Analysis of RNA binding by S. cerevisiae Ssd1, mostly CRAC sequencing data, August 2020 through June 2021
tidyqpcr
qPCR analysis with the tidyverse
tidyqpcr_phd_chapter
variability-prediction-manuscript
The development of a manuscript investigating the relationship between mRNA transcript half-lives and cell-to-cell variability in transcript numbers.
wallacelab
Bioinformatics code created during my PhD studies the Edward Wallace at the University of Edinburgh
who_afro_dashboard
who_covid19_report
WHO covid19 situation reports
workshop-template
workshop-template-1
The Carpentries Workshop Template
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