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This project forked from ctskennerton/crisprtools

0.0 2.0 0.0 365 KB

small utilities for manipulating .crispr files

Home Page: http://ctskennerton.github.com/crisprtools/

License: GNU General Public License v3.0

Shell 21.72% TeX 8.50% C++ 63.98% C 5.80%

crisprtools's Introduction

some tools that might be handy:

* Merge - two or more .crispr files together
* Split - a .crispr file apart
* Filter - remove/copy groups if they fit/don't fit criteria
    + number of spacers
* Extract - fasta sequences
    + direct repeats
    + spacers
    + flankers
    + concensus sequences
* Draw - a graphviz representation of the crispr
* Sanitise - change all the unique ids to incrementing numbers
* Extract/Add metadata

crisprtools's People

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