docking-org / oicr-zinc Goto Github PK
View Code? Open in Web Editor NEWExported files from ZINC for use in OICR ICGC DCC and Collaboratory
Exported files from ZINC for use in OICR ICGC DCC and Collaboratory
We need to add the initial export data (and any scripts used to generate it).
Example for first drug in drugs.ldjson:
"inchikey": "AAKJLRGGTJKAMG-UHFFFAOYSA-N"
...
"drug_class": "AAKJLRGGTJKAMG-UHFFFAOYSA-N
These two files are causing some confusing, should be removed.
Before moving to GitHub, there is one field for atc code:
"atc_classifications": [ { "level4": "L01AA", "level4_description": "Nitrogen mustard analogues", "level5": "L01AA07", "who_name": "trofosfamide" } ],
What's in the git repo now:
"atc_codes": [ { "code": "L01AA", "description": "Nitrogen mustard analogues" } ], "atc_level5_codes": [ "L01AA07" ],
Can we merge these two into one field as before?
Hi!
We were going over the latest data from our import of the drug data and noticed we were missing ATC information for some drugs. Turns out we were not accounting for a structure that it sometimes present in the JSON.
We were expecting something like this:
"atc_level5_codes": ["L01AD07"], "atc_codes": [{"code": "L01AD", "description": "Nitrosoureas"}]
But instead got something like this:
"atc_classifications": [{"who_name": "abiraterone", "level4": "L02BX", "level5": "L02BX03", "level4_description": "Other hormone antagonists and related agents"}]
I've made the appropriate changes in our import process to handle this, but I was curious if there is going to be a consolidation in the future to a single structure or maybe there was a reason for having differing structures?
A declarative, efficient, and flexible JavaScript library for building user interfaces.
๐ Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ๐๐๐
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google โค๏ธ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.